Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_06955 |
Symbol | |
ID | 5556884 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | + |
Start bp | 2048256 |
End bp | 2050823 |
Gene Length | 2568 bp |
Protein Length | 855 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640911424 |
Product | chitinase |
Protein accession | YP_001449057 |
Protein GI | 156978150 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3325] Chitinase |
TIGRFAM ID | [TIGR01451] conserved repeat domain |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTCAA GGATTGAGAG AGAAGTTATG ATTCGATTTA ACCTATGTGC AGCTGGGGTT GCCCTAGCAC TATCTGGAGC TGCAAATGCG GCTCCAACCG CACCAAGTAT CGATATGTAC GGTTCCAACA ACCTGCAGTT TTCTAAAATT GAGTTGGCAA TGGAAACCAC ATCTGGCTAC AACGACATGG TTAAGTACCA TGAGCTAGCT AAGATCAACG TGAAATTTAA TCAGTGGAGT GGCACTTCTG GCGACACTTA CAACATCTAC TTTGATGGCG TAAAAGTGGC AACAGGCCCT ATCACTGGTA GCCAAACAAC GGCATCATTT GAATACGGCC AAGGTGGCTT GTACCAAATG GAAATCGAAG CGTGTGACGC AACTGGTTGT GCTAAGAGCG CACCTGCAGA GATAACTATC GCGGATACTG ACGGTTCTCA CTTACCGCCT CTAACCATGA ATGTTGACCC AAACAACAAA ACCTACAACA CAGACCCAAG TGTCGTGATG GGTACTTACT TTGTTGAATG GGGTATCTAC GGCCGTAATT ACACGGTTGA TAACATGCCT GTCGACAACT TGACTCACAT CCTTTACGGC TTTATCCCAA TCTGTGGTCC AAACGAGTCG GTGAAATCAG TTGGTGGTAA CAGCTTCAAC GCTCTACAAA CTGCCTGTCG CGGTGTGAAT GACTACGAAG TGGTTATCCA TGACCCATGG GCAGCGTACC AGAAGAGCTT TGCTCAAGCT GGTCACGAAT ACAGCACACC GATCAAGGGG AACTACGCAA TGCTGATGGC ATTGAAGCAA CGTAACCCAG ATCTAAAAAT CATCCCATCT ATCGGCGGCT GGACACTTTC TGACCCATTC TACGACTTCG TTGATAAGAC AAACCGTGAC ACATTTGTCG CGTCAGTTAA GAAACTCCTG AAAACGTGGA AGTTCTACGA CGGTGTAGAT ATTGACTGGG AATTCCCTGG TGGCGGCGGT GCTGCAGCAG ATAAAGGCGA CCCAGTGAAC GATGGCCCAG CTTACATCGC GTTGATGCGT GAACTGCGTG CAATGCTGGA TGACCTAGAA GCGGAAACAG GCCGTACCTA CGAGCTAACT TCAGCAATTG GCGTTGGTTA CGACAAAATT GAAGACGTTG ATTACGCAGA TGCTGTGCAG TACATGGACT ACATCTTCGC AATGACTTAC GACTTCTACG GCGGTTGGAA CAACGTTCCT GGCCACCAAA CAGCACTTTA CTGTGGCTCA TTCATGCGTC CTGGTCAGTG TGATGGTAGC GGCGTTGATG AAAACGGCGA ACCGTACAAA GGCCCGGCTT ACACGGCTCA CAACGGCATC CAACTTCTAC TCGCGCAAGG CGTTCCTGCG AACAAACTGG TTCTGGGTAC TGCAATGTAC GGTCGTGGTT GGGAAGGCGT AACACCAGAT ACGCTGACGG ATCCAAACGA CCCAATGACA GGTACTGCGA CAGGTAAACT GAAAGGCAGC ACGACTCAAG GCGTTTGGGA AGATGGCGTG ATTGACTACA AAGGTATTAA GTCATTCATG CTAGGTGCGA ACAACGCTGG CATCAACGGC TTCGAATACG GTTACGACGA GCTAGCAGAA GCACCTTGGG TGTGGAACCG TTCAACGGGT GAACTGATTA CATTTGACGA TCACCGCTCT GTATTGGCAA AAGGTAACTA CGCGAAATCT CTGGGTCTAG CTGGTCTATT CTCTTGGGAA ATTGATGCAG ATAACGGCGA CATCCTTAAC GCAATGCACG AAGGCATGGC CGGTGGTGTG GTTGTTCCAC CAAACCGTAA ACCAACGGCA GAAGCTGGTG CAGACCAGGC AGTAACAGGT CCTGCAAGTG TTGTTCTTGA TGGCAGCAAC TCAACTGATT CTGATGGCAC AATCGCAAGC TACGCTTGGG AGCAAGTATC AGGTACTGCA GTAGTTCTAT CTGGCGCAAA CACTGCGACA GCAAGCTTTG ATGTAGCGGA AGTGACTGCA GAAGAGCAGC TAACGTTCAA ACTAACAGTA ACCGATGACA AAGGCGCAAC CGCTTCTGAT CTCGTTGTAG TAACGGTTAA GCCTGCTGGT GTGATTGATC CACCAAACAC AGCGCCAGTT GCAAAAGTTT CTGCACCTGC AACAGCGAAA GCTGGTGACG TAGTCGTGAT TGATGCTTCA GCTTCTAGCG ATGCTGACAA CGACACGCTA ACGTTTGATT GGACGCTACC TCAAGGCCTA AACGCAACGG TTAACGGCGC GAAAGTGACG TTCACAGCAG CAGAATACCC ACAAGACACA AGCCTAAGCT TCACTGTCAG CGTAAGCGAT GGTCAGACAG CGTCTTCAGC AAGTGCAACC GTTGTTGTAT CTAAGCAGAG CACAGGTGGT GGCACTTGTA CTAACGCATG GGATGCAACG GCTATTTACA CAGGCGGTGA CCAAGTAACG CACGCAGGTA AAACTTGGGA AGCTAAATGG TGGACACAAG GTCAAGATCC TAGCAAGTCT GGCGAATGGG GTGTTTGGAA AGAAGTTGGC ACAGCTAACT GTAACTAA
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Protein sequence | MNSRIEREVM IRFNLCAAGV ALALSGAANA APTAPSIDMY GSNNLQFSKI ELAMETTSGY NDMVKYHELA KINVKFNQWS GTSGDTYNIY FDGVKVATGP ITGSQTTASF EYGQGGLYQM EIEACDATGC AKSAPAEITI ADTDGSHLPP LTMNVDPNNK TYNTDPSVVM GTYFVEWGIY GRNYTVDNMP VDNLTHILYG FIPICGPNES VKSVGGNSFN ALQTACRGVN DYEVVIHDPW AAYQKSFAQA GHEYSTPIKG NYAMLMALKQ RNPDLKIIPS IGGWTLSDPF YDFVDKTNRD TFVASVKKLL KTWKFYDGVD IDWEFPGGGG AAADKGDPVN DGPAYIALMR ELRAMLDDLE AETGRTYELT SAIGVGYDKI EDVDYADAVQ YMDYIFAMTY DFYGGWNNVP GHQTALYCGS FMRPGQCDGS GVDENGEPYK GPAYTAHNGI QLLLAQGVPA NKLVLGTAMY GRGWEGVTPD TLTDPNDPMT GTATGKLKGS TTQGVWEDGV IDYKGIKSFM LGANNAGING FEYGYDELAE APWVWNRSTG ELITFDDHRS VLAKGNYAKS LGLAGLFSWE IDADNGDILN AMHEGMAGGV VVPPNRKPTA EAGADQAVTG PASVVLDGSN STDSDGTIAS YAWEQVSGTA VVLSGANTAT ASFDVAEVTA EEQLTFKLTV TDDKGATASD LVVVTVKPAG VIDPPNTAPV AKVSAPATAK AGDVVVIDAS ASSDADNDTL TFDWTLPQGL NATVNGAKVT FTAAEYPQDT SLSFTVSVSD GQTASSASAT VVVSKQSTGG GTCTNAWDAT AIYTGGDQVT HAGKTWEAKW WTQGQDPSKS GEWGVWKEVG TANCN
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