Gene VIBHAR_06931 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_06931 
Symbol 
ID5556730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand+ 
Start bp2024849 
End bp2025940 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content45% 
IMG OID640911399 
Producthypothetical protein 
Protein accessionYP_001449032 
Protein GI156978126 
COG category[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTAC AACCCAACGT TCCCAAGCAG GGACCTTTTT CATCCCGAAG CAAAACCTTA 
CTTCTGATTT TTGCTTCCAC ACTGCTGGTC GCCAATATCG TGCTACTGCA GGCAACGCGC 
GCACTGACCA AAACCTATTC GGATCAACAA AACCAAGCGA CTTGGTTTTT ATTTCATTTA 
TCCAAAGAGT TATCGGAACT GGTTGGCGAA GCTAGGCGCC TAAACGAAAG CATCAATAAT 
TTTGATAGCG CCGAATTACA ATACGAACTC GCCTGGAGCC GCTTTGACCT TTTGATTCAT 
AACAAAGAAG CTGATTCTTT CCTCTCCCGA GAAGAGGTTC GTGTGTATTT TATTTCCTTG 
TTTGACCGCT TTAAGCAGCT TGAGCCCATT TTAGTCGAAG CCAAAACAGG TAACAGCGTT 
GCGGCCAGTC AGTTTTATCG CGCAACACAA AACCTCTATA TGGAGATGAT TGATTACGTT 
ACCCAGCACT TCCGTGTCGC GAGCCCGCTT TATAAGCAGC AACAGAAACA GGCCTATGAC 
CTACTTCAAG CGCAATACCT GTTGCTAGGC ATTTTCGTTA TCACGGTAGC CTTAATGACG 
TATTTCTATA AACAAGAATC GAAGTTCCAC AAAGCGCTTG CATTAAGCGA CTCACTGACC 
GGCTTGGCTA ACCGAAGCGC TTTGTTTATT GACCTACAAA ACAAGCAGGA GTCAGGAACG 
ACCTTTTCCC TGCTTTTGCT TGATTTGAAC GGTTTTAAAA ACATTAACGA TACGCAAGGA 
CACCAAGCGG GTGATATCGC ATTGACCGAA GTCGCCGAGC GCTTGAAGCA TATGGCTCTG 
GATAACTTTA AAGTCTATCG AATGGGTGGA GATGAATTTG CAGTCGTGAT TAATTCAACG 
GTTAAACAAG ATATCGAAGA AGCGAAGCGT CACATTCATG TGGTGTTTGA GAAGCCTATT 
TTTGCGTCTG ACCAAGCAAG CTCTCTATCA ACCAGCCTCG GCGCGGCATG CTACCCGCAA 
GACACCGACA ACATTGACTT CCTGATCAAT TTAGCGGATA AGCGCATGTA CAAAATGAAA 
TTCCAACGTT AA
 
Protein sequence
MKVQPNVPKQ GPFSSRSKTL LLIFASTLLV ANIVLLQATR ALTKTYSDQQ NQATWFLFHL 
SKELSELVGE ARRLNESINN FDSAELQYEL AWSRFDLLIH NKEADSFLSR EEVRVYFISL 
FDRFKQLEPI LVEAKTGNSV AASQFYRATQ NLYMEMIDYV TQHFRVASPL YKQQQKQAYD 
LLQAQYLLLG IFVITVALMT YFYKQESKFH KALALSDSLT GLANRSALFI DLQNKQESGT 
TFSLLLLDLN GFKNINDTQG HQAGDIALTE VAERLKHMAL DNFKVYRMGG DEFAVVINST 
VKQDIEEAKR HIHVVFEKPI FASDQASSLS TSLGAACYPQ DTDNIDFLIN LADKRMYKMK 
FQR