Gene VIBHAR_06930 details

Gene Information

• Locus tag: VIBHAR_06930
• ID: 5556729
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009784
• Strand: +
• Start bp: 2024340
• End bp: 2024852
• Gene Length: 513 bp
• Protein Length: 170 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 640911398
• Product: hypothetical protein
• Protein accession: YP_001449031
• Protein GI: 156978125
• COG category: [S] Function unknown
• COG ID: [COG3915] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGCGAT CTTGCCGAAA CAAGGGCAAT AACTTCAAAG GGCACAAGAT GAGAAAAACA 
GTAGTACTCG CTTTACTTTT GTTTGCACCC ATACTTTTTG CAAACACGAT ACAGTTTAGC 
AGTTTAGAAA AATCCAATAT CGTTGTGGCA CTGTCAGACC TTGAGTCGAT GCCTCAAACC 
ACTTATACCA CCGCTCTGCC TTGGCTTGAA AAGCCCGCCG AGTTTAATGG CGTAAAACTC 
AGTACACTTT TACAGCACAC ACTCGGTGAA GTTCCTCAGC ACGTCCAAGT AAGGGCAATG 
AATGATTACT ATTCCTATAT TTCACGTGAA GACATCCTTC GTTACCAACC TATCATTGCG 
TATAAACAAG ACCATAATTA CATCAAGGTT CGCAATAAGG GACCATATTG GCTGATCTAC 
CCAGTCACAA AATACCCAGA GCTTGATGTC AGTTACTACC ACTCCCAAAT GGTTTGGCAA 
ATCAATAGGA TCAGTACGAA AGAAGAAGAA TGA 

 

Protein sequence

MTRSCRNKGN NFKGHKMRKT VVLALLLFAP ILFANTIQFS SLEKSNIVVA LSDLESMPQT 
TYTTALPWLE KPAEFNGVKL STLLQHTLGE VPQHVQVRAM NDYYSYISRE DILRYQPIIA 
YKQDHNYIKV RNKGPYWLIY PVTKYPELDV SYYHSQMVWQ INRISTKEEE