Gene VIBHAR_06917 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_06917 
Symbol 
ID5557182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand+ 
Start bp2014426 
End bp2015496 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content36% 
IMG OID640911385 
Producthypothetical protein 
Protein accessionYP_001449018 
Protein GI156978112 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTAA CTCTCCATAA TCTTTCGAAA CCTCTAACTT TAGCTGCCAT TGTTGTATTG 
GTAATATCTG CTGTTAGCAT GATTCTTAGT GATTTGTACT CTCCATTTAC AACGGATAGT 
TACGTGATAA GTGATATATC GAGAATATCT ACTGATATTG ATGGTGTGGT AGAACACATA 
TACGTAAGAA ATGGTCAATT CGTTAAGAAA GGTGACCCTC TTTTTAAAAT TAAAACTGAC 
GAACTTCAAT CTAAGTACGA TACCGCTTAT GCAAATTTGA TTATTCTAGA ACAGAATTTT 
AAGAAGATTG AACTTGAAAT GGGTTTGATT GAAAGTGAAA TAAAACAAAA AACAGAAATT 
GCTAGTAATA AAAAACTGCA CTATATCAGG ATGAAAACCC TTTTACGCAA TAAAGCTATT 
AATCAGCAAC AATATGATGA TGCTTATACA GCGTACGTTG ATGAAATAAG AGAAATAGAA 
CAGCTTAAAA TCAAGTTACA GATTAACCAC GTTAAGCTTG GCTCAGAACA AGGTGGAAAC 
GGTGGGCTGA TGTTAGGGAA AGCTATATTA GAAAAAGCTA GGAAAAACAT TAATAAAGCT 
ACAATACATG CTCCATTTGA CGGAGTAATC ACCAATATGC AGCTCGTAAA AGGTAATTTT 
GTATCAAAGA GCTCACCGCA AATCGTCATA ACCTCTCAAT CACAGAGACA GCTCGTCGCT 
GATTTTAACG AAAAAGGTTT AGATCTTTTA CCCAATGCGG ATTGCTTGGT TGTGTTTGAT 
GCTATACCGG GCAGAATATT CAAGACACAA GTAACTAGCA TAGACCAAGC GATAACTGTA 
ACAGGGGTTG GCGATCAAAA GTTAGGAGAG ACCGCTAAGG TAGCTCAGGG AGATAGATGG 
GTACGCAAAA GCCAATACGT TCGTTCTACT CTGAATATGC CAGATGTTGA TAGCAGTCTA 
ATTTCAGGCT CTCGAGCAAC AGTAATGGTA GTTCGTGACG ATAGCAAATA CTGGAATTCA 
TTTTCATATA TGACGATGCA TATTATTGCG TTGTTTCGTT ACCTATACTA A
 
Protein sequence
MNLTLHNLSK PLTLAAIVVL VISAVSMILS DLYSPFTTDS YVISDISRIS TDIDGVVEHI 
YVRNGQFVKK GDPLFKIKTD ELQSKYDTAY ANLIILEQNF KKIELEMGLI ESEIKQKTEI 
ASNKKLHYIR MKTLLRNKAI NQQQYDDAYT AYVDEIREIE QLKIKLQINH VKLGSEQGGN 
GGLMLGKAIL EKARKNINKA TIHAPFDGVI TNMQLVKGNF VSKSSPQIVI TSQSQRQLVA 
DFNEKGLDLL PNADCLVVFD AIPGRIFKTQ VTSIDQAITV TGVGDQKLGE TAKVAQGDRW 
VRKSQYVRST LNMPDVDSSL ISGSRATVMV VRDDSKYWNS FSYMTMHIIA LFRYLY