Gene VIBHAR_06819 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_06819 
Symbol 
ID5558794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand- 
Start bp1934303 
End bp1935328 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content44% 
IMG OID640911287 
Productintegrase 
Protein accessionYP_001448928 
Protein GI156978022 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCAAATCA CAACAAGAGC AGCCAAAGCT GCCAAGGAAA TCGATATGAG TAACAGTCAG 
ATTACTGTAA CCCAGTACAT TAAAAAGTTC TTACACAGCC GGAAGTTTGC GGTTAAACCT 
TCCACATTCA TCTCCGAAAA ATGCAAAGCT AATAAGCTTA CTCGCTATTT CGGTTCGACG 
CCCATAGACG CTGTGCGTCA TAGTGACATC ATCGAAATGC TGGACGAGTT GCATGAGCGC 
TATTCGAACA AGAGCATCAA CGAATTTCTT ACTATTCTAA GAGCAGTGTT TCTGCGTGCT 
GAGCGTGATG GTGTCGTTGA TAGAAACCCA ATGAACGGCA TCAAAAATCT TAAAGCCATT 
AAGCCTATTC CAAATCCATT TACTAAAAAA GAGCTCAGTC AACTCCATCA AACGCTGGGT 
TGTGAGCAGG GAAAAAATGC TGTTGAGCTC GATGTATACA CGGGATTACG TATTAGTGAA 
TTACTTGCTC TAAGTTGGGA GGATATTGAT TGGGAAAATC GAGTTTTGTT GGTTCGTCGT 
GCCAAGGTAC TTCAAAGCTA TAAAACGACG AAGACGAAAG AATCAACACG TAAAGTCGAG 
CTGAATGAGT TAGCGATACA AGCTCTTAAA AGGCAGTGGG CACTGACTGG TCAGCTCGAA 
GCGGTTAAGA TATCAGTCTT GCAAGATGAC AATAAATCTT ACATAGAGGA ACGCGTCCAC 
ATTGTTTTTT ACAACAGCCA GACTAACCAA CCATTCCTTC ACGCAGCTCA ATTCAACAAT 
ACGTTCTTTC GTGCCTTCTT GGAAAAGGCT GGGGTTGCTC ATCGTGGCGT AGGGCAATTG 
CGTCATACCT TTGCCAGTCA AAACCTCACT GCTGGCATCG CGAAAGATTG GATTGCGATG 
CAAATGGGGC ACGCTGATAC AAGCATGATT GATGACCACT ATGGTCAGTG GATACCCGCA 
GACTCCCCCA ACTATTCGGC TTTGTTGCTT AAATCGATGG AACTAAATCA AGAAGCTACG 
ATCTGA
 
Protein sequence
MQITTRAAKA AKEIDMSNSQ ITVTQYIKKF LHSRKFAVKP STFISEKCKA NKLTRYFGST 
PIDAVRHSDI IEMLDELHER YSNKSINEFL TILRAVFLRA ERDGVVDRNP MNGIKNLKAI 
KPIPNPFTKK ELSQLHQTLG CEQGKNAVEL DVYTGLRISE LLALSWEDID WENRVLLVRR 
AKVLQSYKTT KTKESTRKVE LNELAIQALK RQWALTGQLE AVKISVLQDD NKSYIEERVH 
IVFYNSQTNQ PFLHAAQFNN TFFRAFLEKA GVAHRGVGQL RHTFASQNLT AGIAKDWIAM 
QMGHADTSMI DDHYGQWIPA DSPNYSALLL KSMELNQEAT I