Gene VIBHAR_06558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_06558 
Symbol 
ID5556545 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand+ 
Start bp1709321 
End bp1710307 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content50% 
IMG OID640911031 
Productmuconate cycloisomerase I 
Protein accessionYP_001448676 
Protein GI156977770 
COG category[M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only 
COG ID[COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATTC ATGTAGAGCC TGTCACCATT GCGATGGCGA CGCCTTTCCG TATATCACGT 
GGCAGCCGAA CCGAATGTCA CGTGGTGCGA GTAACCATAG AGCAGAACGG CATCAGCGCC 
CAAGGTGAAT GTACGCCTTA TCCCCGTTAT GGCGAGTCGG TGGAATCGGT GATCAAAGCC 
ATTTCTCAAG CCGCTCAGGA ACTACAAGGT TTGTTTGCAA AAGGCGATGC GAACATAGTC 
TCTCTAAGAG AAAAGTTGCA AACCCTTCTC CCTGGCGGTG CGGCACGTAA TGCACTCGAC 
TGTGCGATGT GGAACTTACA AGCTAAGCTA GCGGGCAAGC AACACACTCA AGATTTATTT 
GAACTGCCAA CATCGATTGT CACTGCGATG ACCGTGTCGA TTAACACGCC AGAGGCAATG 
GCAAACCAGA CCCGTAGTTA CATCGAACAA GGCGCAAAAC TACTTAAAGT GAAGCTCGAT 
GGCGAACAAG TGATTGAACG TGTTCGCGCA GTTCGTGAAG CGGCAGGTGA GGCAATGATC 
GTGCTGGATG CAAACGAAGC ATGGCAAGAA CTGGATTTAG ACGCCACCTT TGCCGCGCTA 
GTACCACTGA ATATTGCGAT GATTGAGCAG CCTTTGCCAT CGAATGACGA TGACAAGCTA 
AAAGACATTT CGCACCCAAT TCCACTTTGT GCCGATGAAA GTTGCCATAC ACGCCAGCAA 
TTGCATGAAT TAGTGGGCAA ATACGATATG GTCAACATCA AGCTCGACAA GACGGGTGGT 
CTTACCGAAG CCCTACTGCT TGCAGAAGAA GCGAAACGCC TTGGCTTTAC CTTGATGTCT 
GGTTGCATGT TAGGCACTTC ACTGGCGATG CGTGCAGCGC TACCTATTGC TGTCCAATCG 
AAAGTGGTCG ACTTAGATGG TCCGGTTTTA CTGGGTCAGG ATGTTGAGCC TGCTTTGGTA 
TATCGAGAAG GTGAAATCGT CCTGTAA
 
Protein sequence
MKIHVEPVTI AMATPFRISR GSRTECHVVR VTIEQNGISA QGECTPYPRY GESVESVIKA 
ISQAAQELQG LFAKGDANIV SLREKLQTLL PGGAARNALD CAMWNLQAKL AGKQHTQDLF 
ELPTSIVTAM TVSINTPEAM ANQTRSYIEQ GAKLLKVKLD GEQVIERVRA VREAAGEAMI 
VLDANEAWQE LDLDATFAAL VPLNIAMIEQ PLPSNDDDKL KDISHPIPLC ADESCHTRQQ 
LHELVGKYDM VNIKLDKTGG LTEALLLAEE AKRLGFTLMS GCMLGTSLAM RAALPIAVQS 
KVVDLDGPVL LGQDVEPALV YREGEIVL