| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_06556 |
|---|
| Symbol | |
|---|
| ID | 5557685 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009784 |
|---|
| Strand | + |
|---|
| Start bp | 1707334 |
|---|
| End bp | 1708182 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640911029 |
|---|
| Product | transcriptional regulator |
|---|
| Protein accession | YP_001448674 |
|---|
| Protein GI | 156977768 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAACCG GAACCGTGTC TGGTGCCGCG CGCCTATTGC ATGTATCGCA ACCTAATGTC
ACTCGGGTAC TTGCCCATAC GGAACAACAA CTTAGCTTTG CCCTGTTTGA GCGTGTCAAA
GGCCGCTTAG TACCGACCCA AGAAGCCAAA GCCCTACTGC CAGAAGCCGA GAAAGTCTAC
CAACAGCTTG GGCAATTTCG TTCCCTCACC AATAAGGTGA AGCAAGGCAC TCAGCACTTG
AGAGTCGGAG CGCCGCCTGT CTTGGCTTCC CAACTGCTTG CTTCAACGGT TGCTACACTT
TCAAAGCAAC AAGGCATCTC ATTTGAACTA TTAACCGCAA ACCGTGATGA GCTGTGTTCA
GGCTTACTTA AGCACGAATT GGATGTGGCG ATAACTTTTG GTGAAGAAGC GCCACCCGCA
ATTTTGAGTG AGGTTTTACT CAAGCAGCAA CTCGTTCTGA TTGCGCCAAA AGTAGCGCTC
AATTCGGACG ACGACGCGGT ATCGTTTGAT GATTTAATTC AGCACGAATT GCCAATCATC
GGCTTGGACA GTCGAGACCC ACTCGGTTTA TTGCTACATC AAACGCTTTC CGCATGTGAT
GAACATTATC ACCATGCGAT CACAGTGCGC AGTTACGCCG CTGCCGCCGA GCTAGTCAAG
CATCACGCGG GTTTTGCGAT TGTCGACCCA TGGACAGCAA AACAGTATCA AGATGACGAA
TCAGTAAGCG TGCGCTCACT TTCTCCAGCG CTGTCATTTT CTATCTCTAT CTTGTTTGCA
GAACACTCGC CGCAATCCAT TTCTACGAAG CTTTTTATTG AGTCGCTAAA GCAGCATGTT
AATCAGTAA
|
|---|
| Protein sequence | MQTGTVSGAA RLLHVSQPNV TRVLAHTEQQ LSFALFERVK GRLVPTQEAK ALLPEAEKVY
QQLGQFRSLT NKVKQGTQHL RVGAPPVLAS QLLASTVATL SKQQGISFEL LTANRDELCS
GLLKHELDVA ITFGEEAPPA ILSEVLLKQQ LVLIAPKVAL NSDDDAVSFD DLIQHELPII
GLDSRDPLGL LLHQTLSACD EHYHHAITVR SYAAAAELVK HHAGFAIVDP WTAKQYQDDE
SVSVRSLSPA LSFSISILFA EHSPQSISTK LFIESLKQHV NQ
|
|---|
| |