| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_06540 |
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| Symbol | |
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| ID | 5557820 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009784 |
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| Strand | + |
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| Start bp | 1693020 |
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| End bp | 1694348 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640911013 |
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| Product | hypothetical protein |
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| Protein accession | YP_001448658 |
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| Protein GI | 156977752 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATGA ATAAAAAGCT GCTGTTCTTT CCTGCCCTTG CTGTTGGGGT CGTCATTCTA
TTTTTGGCGA TTAGCCTTAA GCCAGATTTG CCAGTAAAGC CTGCGGGTGA TCGTGCAAGA
TTGGTTGATA CAATTCCTCT GGAACTCAAA GCCATCGCAC CTGTTGCTAT TGGCTTTGGT
AAAATCGCTC CGAAAGTTGA ATGGAAAGCG ATAGCTGAAG TGACAGGTAA AGTGGTTTAC
CGTCATCCGC AACTGGAAAA AGGACAAGTG TTGCAAACAG GAACGGAAAT CTTGCGCATC
GATCCACTCG ATTACGAATT GAAACTGGTT CAAGCTCAAG CCGATCTCAA ATCTGCCCAA
ACTTCTCTGG CTAAGCTGAA CCAAGAAGAA GCGAATCTCA AAAGCACACT CAAGATTGAA
GCCAACCGCC TAATTATCGC TAACAAAGAG TTAGACCGTA AACAAAACCT GCGTAAGAAA
GGCTTAACCT CACAATCGGA CGTTGACCAA CAAGAACAAA GCGCACTCTC TCAACGTAAG
GTAGTGCTGG ATATCGAAAA CCAAATCGGT TTGATGCCGG ATGAAAAGCG TGTAGCAGAA
GCCCTAGTTA AGGTCAATGC ATCAAAAGTG GACGAAGCGA AACGTTCGCT TGATAAAACC
ATCATCACCC TTCCTTACGA TTTGCGCATT GCAGAAGTCG AGATTGAGCA AAACCAAGTA
GTTAATCTAC AACAGACCAT GGTGACCGGG CATGGTATTG ATGTCATGGA AGTGGAAGCT
CAGCTGTCCA TTCATGACAT GCAAACTTTG GCGGCGAGCA TCGGTGAGTT TGTCCGTGAT
GAATCTGGTA TTCCACAACC TGATATGAAT GCGATTCATG CCAACATTGA ACTCAACAGC
GGCAACCTCT CCGCTAGTTG GCCAGCGAAA GTAGCGCGTA TCAGTGAAAC AGTTGATCCA
AGCCAAGCGA CTGCTGGTGT GATTCTGGAA ATTGAACAAG ACTACCGCGC ATTAGACCCA
ACCTCTGCGC CTCCATTGGT TAACGGCATG TTTGTGCGTG CCTTGATTGA GGGACAAGAG
AACCCGAGTT GGGTCATACC AGAGCGTGCG CTTCATGGCG ATAAGATTTA CCTGATGGGT
GATGACAATC GTCTGCAAGT GGTGACGGTT GAAGTGTTAT ACCGCCGCAA TAACCAAGTG
GTGATCGATG GTGAACTAGA GCAAGGCCAG AAGCTGATCA TAAACGATTT GCTACCTGCG
ATTAACGGCA TGCTATTGAA AGAGTCACCT GAACAGTCAG AAGCCGCTAT TGAGGAGTCT
GATTCATGA
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| Protein sequence | MKMNKKLLFF PALAVGVVIL FLAISLKPDL PVKPAGDRAR LVDTIPLELK AIAPVAIGFG
KIAPKVEWKA IAEVTGKVVY RHPQLEKGQV LQTGTEILRI DPLDYELKLV QAQADLKSAQ
TSLAKLNQEE ANLKSTLKIE ANRLIIANKE LDRKQNLRKK GLTSQSDVDQ QEQSALSQRK
VVLDIENQIG LMPDEKRVAE ALVKVNASKV DEAKRSLDKT IITLPYDLRI AEVEIEQNQV
VNLQQTMVTG HGIDVMEVEA QLSIHDMQTL AASIGEFVRD ESGIPQPDMN AIHANIELNS
GNLSASWPAK VARISETVDP SQATAGVILE IEQDYRALDP TSAPPLVNGM FVRALIEGQE
NPSWVIPERA LHGDKIYLMG DDNRLQVVTV EVLYRRNNQV VIDGELEQGQ KLIINDLLPA
INGMLLKESP EQSEAAIEES DS
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