| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_06531 |
|---|
| Symbol | |
|---|
| ID | 5557564 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009784 |
|---|
| Strand | + |
|---|
| Start bp | 1682673 |
|---|
| End bp | 1683689 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640911004 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001448649 |
|---|
| Protein GI | 156977743 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2199] FOG: GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACAGAA CGCAGTTCAC CAGAATTTTT ACGCGCTACT ACATGCGCTC AACAAGTTTG
GGGATTCTTA TTACCCTATT CGCTTGTGCA ATCAGAGGGG TTGATTATGT TGTATACCTT
CCTTATGCAT TATCCGCGGG AGTTTGTTTT ACCTACCTCT GGGTGGGCAA AGCATTCGCA
CTCGAACAAA AACAGCGCTC AGTTGTTATT GCACTGATCC TCGGATATAC CCTCACATTT
TATTTGTACT ACTTCTTAGG CGGACACTTT CTTTTTTCTT CCTTGGTTAC AGTCAATATT
CTTCTCACTT TGATTGAGTT TGGCGTACTT TGGTCGTCAA TCACATATGT CCTATCAATG
GCTATTTGCT TTAACATTGA TTTGATAACC GCGGGTAACG ACCCGTTTAA ACTACAAGGT
TTAAGTGAGT TTTCCATTCG GAGTACGTTT CTGTACTTGT TCAACCTATT TATTTACAAG
GGCTTGCGCT CAATTGAAAG TTATTGGCAC AGCGCTTGGC AAACGCAATA TGAACAAGTT
GAAAAACTAG AAAGACTGCT CGAGATAGAT GAGCTAACAG GCTGCTACTC TCGCTTCAAA
GGCAATCAGT TGATAGAGCA ACAGATTCAA CGAGCTCAAC CGTTCACTTT GCTATATATC
GACTTAGATG GCTTTAAAGC CGTGAATGAC GAATTTGGTC ACGACGCTGG AGACAAAGTA
CTGCGTATCA CTGCGCAACG TATTTTGAAC ATGCTGCACA ACGACCAATT CGCCACAAGA
ATTGGCGGTG ACGAGTTCAT TCTTTGCTTA CCTGAGCTCG AAAATACAAA GGATTTAGAA
CAGTTTCAGT CTTTGCTACA TCAAGCATGC AGTGCACCTA TTTTTATCCA TTTTCAAAAC
GTTCACATCG GTTTGAGTGT TGGCGTTGCT CGCTTCCCTT ATGAGGGAAG CTCTAGTGAC
ACCTTAATCC AACATGCAGA CCAAATGATG TACCTCACTA AAAGATCAAG AACATAG
|
|---|
| Protein sequence | MDRTQFTRIF TRYYMRSTSL GILITLFACA IRGVDYVVYL PYALSAGVCF TYLWVGKAFA
LEQKQRSVVI ALILGYTLTF YLYYFLGGHF LFSSLVTVNI LLTLIEFGVL WSSITYVLSM
AICFNIDLIT AGNDPFKLQG LSEFSIRSTF LYLFNLFIYK GLRSIESYWH SAWQTQYEQV
EKLERLLEID ELTGCYSRFK GNQLIEQQIQ RAQPFTLLYI DLDGFKAVND EFGHDAGDKV
LRITAQRILN MLHNDQFATR IGGDEFILCL PELENTKDLE QFQSLLHQAC SAPIFIHFQN
VHIGLSVGVA RFPYEGSSSD TLIQHADQMM YLTKRSRT
|
|---|
| |