Gene VIBHAR_06413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_06413 
Symbol 
ID5557381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp1576974 
End bp1578308 
Gene Length1335 bp 
Protein Length444 aa 
Translation table11 
GC content49% 
IMG OID640910886 
Productdihydroorotase 
Protein accessionYP_001448531 
Protein GI156977625 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0044] Dihydroorotase and related cyclic amidohydrolases 
TIGRFAM ID[TIGR00857] dihydroorotase, multifunctional complex type 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGTAA CACTGATTAA AAACGCCCTT GTCGTCAACG AAGGAACCAT TATCGAGACC 
GATTTACGAA TTGTCGGTCA GCGAATTGAC ACTATCTCAG CCAACATCGC GGCTAAACCG
GAAGATACGG TGATTGATGC GAAAGGGTGC TATTTGATTC CCGGTATGAT TGATGACCAA
GTGCACTTTC GTGAGCCGGG GTTGACGCAC AAAGGTTCGA TAGCGACAGA ATCCAGGGCG
GCGGTTGCCG GCGGTATTAC AAGCTATATG GAAATGCCGA ACGTTAGTCC TGCAACGACC
ACCATTGAGG CGCTAGAACG TAAATTCTCT ATTGCCGAGC AGAGCTCCCT CGCGAACTAC
TCTTTCTACC TTGGTGCGAC CGAAGACAAC CTTGAGCAAA TCAAACAGCT TGATCCGAAG
AAGCATTGCG GCGTGAAAGT GTTTATGGGT GCTTCTACGG GCGATTTGTT GGTCGAAGCG
CCTCAAGCCT TAGATGAAAT TTTCCGTGAT TCACCAGTGA TGATAGTGAC GCACTGTGAG
AGTGGCCCTT TGATTGCGCA AAACAAACAG CGACTACTTA AAGAGAAGTC GGAATTTACC
ATTGAAGATC ATCCGTTACT GCGTGATGAC GAAGCGTGTT ATGCGTCTTC CTCTTATGCG
GTAGAGCTGG CCAAGAAGCA CAACAGTCAG CTGCATGTTC TGCACATCAC GACAGCAAAA
GAACTGGCTT TGTTTGAAGC GGGCCCGATT CAAGGTAAGA GCATCACTGC AGAAGCGTGT
GTTCACCACC TCTGGTTTAG CAATGAAGAT TATGCAGAGC GTGGTAACCA AATTAAATGC
AACCCAGCCG TAAAATACCC AAGCGACCGC GAAGCCATTC TAAAAGCGTT GAGTACTGGC
CAAATTGACA TTATCGCCAC TGATCACGCA CCTCACACAT GGGAAGAAAA ACAGGTGCCT
TATGAGCAAG CGCCAGCGGG CTTACCTCTG GTGCAGCACG CACTGCTGTC TTTGTTCGAT
CAAGTTGCTC GCGGGCACAT GACGATGGAG CAAGTGGTAG AGAAAACGGC CCACAACCCA
GCGATTCGTT ATGGTGTTCA GGAGCGCGGT TTTATCCGTG AAGGCTATTT TGCAGATTTG
GTTCTTGTTG ATACAGCAGC ACCAACGCCG GTGACGAACG AGAACAGCTT ATACCACTGT
GGTTGGTCGC CATTTGCTGG TCACCAGTTC TCGGCTCAAA TTAAGAACAC ATGGGTCAAT
GGCGGCCTAG TGTATGCCAA CCAACAAGTG AATGAGCACG CTGCACACGC CATGCGATTG
GTATTTGATC GCTAG
 
Protein sequence
MSVTLIKNAL VVNEGTIIET DLRIVGQRID TISANIAAKP EDTVIDAKGC YLIPGMIDDQ 
VHFREPGLTH KGSIATESRA AVAGGITSYM EMPNVSPATT TIEALERKFS IAEQSSLANY
SFYLGATEDN LEQIKQLDPK KHCGVKVFMG ASTGDLLVEA PQALDEIFRD SPVMIVTHCE
SGPLIAQNKQ RLLKEKSEFT IEDHPLLRDD EACYASSSYA VELAKKHNSQ LHVLHITTAK
ELALFEAGPI QGKSITAEAC VHHLWFSNED YAERGNQIKC NPAVKYPSDR EAILKALSTG
QIDIIATDHA PHTWEEKQVP YEQAPAGLPL VQHALLSLFD QVARGHMTME QVVEKTAHNP
AIRYGVQERG FIREGYFADL VLVDTAAPTP VTNENSLYHC GWSPFAGHQF SAQIKNTWVN
GGLVYANQQV NEHAAHAMRL VFDR