Gene VIBHAR_06228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_06228 
Symbol 
ID5558439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand- 
Start bp1409423 
End bp1410427 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content46% 
IMG OID640910702 
Producthypothetical protein 
Protein accessionYP_001448347 
Protein GI156977441 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG1776] Chemotaxis protein CheC, inhibitor of MCP methylation
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTTTC CTGTACTCAT CTGTGATGAT TCAGCGTTAG CACGCAAGCA GATGGCAAGA 
TCACTACCAG CAACATTGAA TGCAGACGTG ACATTTGCCA TTCATGGTAA AAATGCGCTT 
GAAGAGTTGG CGCAAAAAGA ATTCAAGCTG ATGTTTCTCG ACCTCACCAT GCCAGAGATG 
GACGGTTTTG AAACATTAGA AAACATGAAA CGCTTAGGTA TCCAAACGCC CGTGGTGGTT 
GTGTCTGGTG ATATTCAACC TAAAGCGAAA GAGCGTGTCT TTGCGCTCGG TGCGAAAGCA 
TTTATTCAAA AGCCGATTGG TAAAGATGAG CTTAAGGCGA CGTTAAAAGA GCTGATAGAG 
CCTAATGATC GTCCCCAAGT CATTACTCCT ACCACGATTG AATTACCCAT TCTGCGTCGC 
CGCGACATCT ATATGGAAGT GGCCAACGTC TCTATTGGTC GTGCGGCCGA CGCGCTAGCT 
CGCCACTTTG ATGTGTTTGT TCAGCTCCCT CTTCCAAACG TGAATATCTT TGAAGTCAGT 
GAGCTGCACA TGGCGCTACG AGACTTAGCT TCTCACGATA ACGTCTCCGG TGTTTGCCAA 
GGCTTTTGTG GTGAAGGCAT CGCTGGCGAA GCGTTAGTGA TCCTAAGCGA CTCCAGTGTT 
TCTGATCTTA AGAAACTGAT GAAGGTGCCA GCAGACAGTG AAGAGTTGGA AGAACTAGAA 
CTGTTGATGG ACATATCCAA TATCTTGGTT GGGTCATTCT TGAATGGTTT GGGCGAGCAG 
TCTGAAGTCC GCTTTTTCCA GAGCTCACCA GTGCTGCTTG GTCAGCATAT TTCCATCGAT 
TCTATTATCG AGTCGACAAC TGGTGCATTT AGCCGAACCA TGACATTTGA GGTCAGCTAC 
AACATTGAAG GCACTTCCAT CCGTTGTGAC CTACTGTTTA TGTTTGTTGA TGAGTCACTG 
CCGTTGCTGG ATAACAAATT GTCGTACCTA ATGGAGGATT TCTAA
 
Protein sequence
MSFPVLICDD SALARKQMAR SLPATLNADV TFAIHGKNAL EELAQKEFKL MFLDLTMPEM 
DGFETLENMK RLGIQTPVVV VSGDIQPKAK ERVFALGAKA FIQKPIGKDE LKATLKELIE 
PNDRPQVITP TTIELPILRR RDIYMEVANV SIGRAADALA RHFDVFVQLP LPNVNIFEVS 
ELHMALRDLA SHDNVSGVCQ GFCGEGIAGE ALVILSDSSV SDLKKLMKVP ADSEELEELE 
LLMDISNILV GSFLNGLGEQ SEVRFFQSSP VLLGQHISID SIIESTTGAF SRTMTFEVSY 
NIEGTSIRCD LLFMFVDESL PLLDNKLSYL MEDF