Gene VIBHAR_06156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_06156 
Symbol 
ID5558888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand- 
Start bp1333943 
End bp1334620 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content47% 
IMG OID640910630 
Producthypothetical protein 
Protein accessionYP_001448276 
Protein GI156977370 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGATT CAATTACGCA GGTGCTGTTT GCTTTGTGGC ACCAAGACTT TACTGCACTG 
ATGGCACCGG GTAGTGCAGG TCTTATCTAC TTTGTAGTGG GTGCGCTTAT TTTTCTCGAG 
AGTGGTTTTA TTCCCGCGGC ACCTTTCCCT TGTGACAGTG TTGTTGTGCT TTCTGGCACT 
TTAGCAGCGG TGGGCGTACT AGACCCAGTG ATGATCATGT TGGTGATCGT GGTGAGTGCG 
GCAATGGGCA GTTGGGCTGC GTACCTACAA GGTAAATGGT TAAACCGTTT ACCAAAGGTG 
CAGGGGTGGG TAAATGCAGT GCCAGCAAAA CGCTTGGAGC AAGTTGACAT GTTACTTGGT 
AAGCATGGTT TAATTGCATT GTTCTGCGCG CGTTTTATTC CTGTTGTTCG CTCTTTGCTG 
CCATTAATGA TGGGCTTGCG CGTTAATCGC GTGAGTAAGT TCCATTACTT CGCATGGTTG 
AGTGCAATTC TATGGACTCT GCTGCTTTGT GGTTTAGGTT TATTATTGCC TCTACTGCCA 
GAGAAGCTTA ACAAGATTGT GACCATGGGA TTGATGGCTG CACCGGTGAT TACCCTGACT 
ATTGCCATTA TGAGCTTTGT ATTGGTGAAG GTGCGTAAGG CTTGGGGTAA ATCGAAAACC 
ACGCCGCAAT TGCCATAG
 
Protein sequence
MFDSITQVLF ALWHQDFTAL MAPGSAGLIY FVVGALIFLE SGFIPAAPFP CDSVVVLSGT 
LAAVGVLDPV MIMLVIVVSA AMGSWAAYLQ GKWLNRLPKV QGWVNAVPAK RLEQVDMLLG 
KHGLIALFCA RFIPVVRSLL PLMMGLRVNR VSKFHYFAWL SAILWTLLLC GLGLLLPLLP 
EKLNKIVTMG LMAAPVITLT IAIMSFVLVK VRKAWGKSKT TPQLP