Gene VIBHAR_06116 details

Gene Information

• Locus tag: VIBHAR_06116
• ID: 5556760
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009784
• Strand: +
• Start bp: 1278382
• End bp: 1278891
• Gene Length: 510 bp
• Protein Length: 169 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 640910590
• Product: hypothetical protein
• Protein accession: YP_001448236
• Protein GI: 156977330
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG1629] Outer membrane receptor proteins, mostly Fe transport

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGGGATCC CTCAGAACCA AGGCGCCATT TATACCAACG TTGGTGACCT AGATAACCAA 
GGTATTACTG CTTACTTAGG TTATGCAATT GCTGATGTCT CTGCTCGCTT GAGCTACAAC 
CAATCTCGTC CAGAACTTAA CGGTACTCCA CTATCAGATG AAGACTCAAC GCTGGGCACA 
TCTATCGGCG ACACTTGGGC TCTTGACCTC ATTTACCAAC CAATGGAGTC ACTGGAGTTT 
GGCTGGAATG CTCGATTTGT TGAGCGCCTA ACCGATGTAG CGAATCCAAC CGTTCACCCA 
GAAAAGCCAG GCTATGGTGT GCATGATGTT TACGCATATT GGATGCCTAT TGCAGACGAA 
GAGTTATCTC TGACGCTGTC TGTTAAGAAT GTATTCGACA AATACTACTT TGACCACGCA 
TCGTACATGG CATACATCGG CAGTCCTGTC GCTCAAGGTT ATGCAAGCCC AGGACGAGAC 
TTCCGCTTTA ACGTCACTTA CGCGTTCTAG 

 

Protein sequence

MGIPQNQGAI YTNVGDLDNQ GITAYLGYAI ADVSARLSYN QSRPELNGTP LSDEDSTLGT 
SIGDTWALDL IYQPMESLEF GWNARFVERL TDVANPTVHP EKPGYGVHDV YAYWMPIADE 
ELSLTLSVKN VFDKYYFDHA SYMAYIGSPV AQGYASPGRD FRFNVTYAF