Gene VIBHAR_06091 details

Gene Information

• Locus tag: VIBHAR_06091
• ID: 5556849
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009784
• Strand: +
• Start bp: 1255603
• End bp: 1256220
• Gene Length: 618 bp
• Protein Length: 205 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 640910565
• Product: hypothetical protein
• Protein accession: YP_001448211
• Protein GI: 156977305
• COG category: [R] General function prediction only
• COG ID: [COG1011] Predicted hydrolase (HAD superfamily)
• TIGRFAM ID: [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAACCAG TAGAAATTAA AAATGTCGTA TTCGATGTAG GTAATGTACT CGTAAGGTGG 
TCACCAATCG AAATCGTGAG ACTGACCTTT GGAAATGATG TCGATGCCGA GGCGTTAGCG 
AAAGATCTTT TCATGAGTGC GATTTGGTTG GATTTAAACA AAGGGCTGAT TACAGAAACA 
CAAGCCAAAC AGCGGTATCA ACTCGAAAAG CAGTTGTCTG AGAGCGAAGC AGAGCGTTTC 
TTTTACTACG TGAAGCATAC CCAACTTCTG ATTTATGGCA GTGTGGACCT TCTAAAGCGC 
ATAAAATCAG CAGGATATCG TGTGTTCGCT CTGACTGACA ATGTAGTAGA GATCGTTGAG 
TATCTAAAAG CTACGTATGA CTTTTGGCCG TTATTTGAGG GCACAACAGT ATCTGCAGAA 
CTTGGCTTGT TGAAGCCTCA ACCAGAGATT TATCAGAGCC TATTAGAAAC CCATCAACTT 
TTAGCGAAAG AAACCGTGTT CCTCGACGAT ATGCCCTATA ACGTTGAAGG CGCACGCGAG 
GTAGGCATTG AGGCGATTCA ATTTAAGCAC GCAGAACAAT GTGAGTGTGA ACTAAAAGCC 
ATGGGGTTGA GCTTTTAG 

 

Protein sequence

MQPVEIKNVV FDVGNVLVRW SPIEIVRLTF GNDVDAEALA KDLFMSAIWL DLNKGLITET 
QAKQRYQLEK QLSESEAERF FYYVKHTQLL IYGSVDLLKR IKSAGYRVFA LTDNVVEIVE 
YLKATYDFWP LFEGTTVSAE LGLLKPQPEI YQSLLETHQL LAKETVFLDD MPYNVEGARE 
VGIEAIQFKH AEQCECELKA MGLSF