Gene VIBHAR_06039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_06039 
Symbol 
ID5557597 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand- 
Start bp1217808 
End bp1218809 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content46% 
IMG OID640910513 
Producthypothetical protein 
Protein accessionYP_001448159 
Protein GI156977253 
COG category[R] General function prediction only 
COG ID[COG1988] Predicted membrane-bound metal-dependent hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGATCCAT TAACTCAAGG ATTAGTTGGG GCATCCTTGT CCCTGTCAGC GGGTAAAAAG 
CAGCATCTAG TGTCTGCTGG TGCACTTGGC TTACTTGCAG GCATGGCGCC AGACTTGGAC 
ATATTGATCC GATCAACCAA GGATCCATTG CTGTTTTTGG AATTTCACCG ACAGTTCACA 
CATTCACTTT TCTTTATCCC TATTGGAAGC TTTATCTGTG CCCTGATATT ACATCCACTT 
ATTGCTAAAA AAGGTAGATT ATCCTTCAAA CAAAGCTGGT GGTACTGCGC ATTAGGTTAC 
GCTACGCATG GCTTATTGGA CGCATGTACC AGCTACGGGA CCCAGCTCTT ATGGCCGTTC 
ACCGATACCC GTTATTCTTG GAGTACGGTT TCCGTGATTG ACCCTCTTTT TACCTTACCA 
ATCTTGTTCA CTTTGATACT TGGCCTGATG AAGCGTAACC CTTGGTATCC GCGTATTGCT 
GTAGTTTGGG CGCTTGTTTA TCTCACATTT GGCATGTATC AAAGAGACCG AGCAGAAGAG 
GCAGGTTGGG CGTTGGCTGA AGCAAGGCAG CATACGCCAC AAAGATTAGA AGCCAAACCC 
ACGTTCGCAA ATACCTTGGT TTGGAAAGTC ATCTACGAAA CCGAACGCCA TTACTACGTT 
GATGCCATAA GAGCAGGGAG GTCAATAAAA ACGTATACCG GAGAGTCCAT TGCCAAGTTG 
AATGTGGCTG CAGATTTTCC ATGGTTGGAT CCTGCATCGC AGCAAGCCAA AGACATTGAA 
CGATTTCGTT GGTTTTCTGA TGGCTTCATC GCCAGAGCCC CAAACAAGGG ATTGCGAATC 
ATTGACGTGC GTTACTCTAT CGTACCAAAT GAGTTCAACG CTCTGTGGGG GATTGAGTTA 
TCAGAGACAG CCGATAAAGG TATGCATGTA GAATACACCA CACATCGCGA CAGCTCTCAG 
CAATCAAGGC AAGCTTTTAT TGAGATGTTG AAAGGCGATT AA
 
Protein sequence
MDPLTQGLVG ASLSLSAGKK QHLVSAGALG LLAGMAPDLD ILIRSTKDPL LFLEFHRQFT 
HSLFFIPIGS FICALILHPL IAKKGRLSFK QSWWYCALGY ATHGLLDACT SYGTQLLWPF 
TDTRYSWSTV SVIDPLFTLP ILFTLILGLM KRNPWYPRIA VVWALVYLTF GMYQRDRAEE 
AGWALAEARQ HTPQRLEAKP TFANTLVWKV IYETERHYYV DAIRAGRSIK TYTGESIAKL 
NVAADFPWLD PASQQAKDIE RFRWFSDGFI ARAPNKGLRI IDVRYSIVPN EFNALWGIEL 
SETADKGMHV EYTTHRDSSQ QSRQAFIEML KGD