Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_06034 |
Symbol | |
ID | 5557456 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | + |
Start bp | 1214573 |
End bp | 1215655 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640910508 |
Product | hypothetical protein |
Protein accession | YP_001448154 |
Protein GI | 156977248 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00880] Multidrug resistance protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTTCAGC GCATTTTGAG CTACAACTTT ATTGGTATCT GTCTCGGCTC TTCATTATAC GGTCCTCTAT CCGATCATTT TGGCCGCAGA AAGGTGTTAA TATTTGGTTT TAGCATTTTT CTTACCGCAA GCATTGGCTG TATCTTTTCG ACAAGTATTG AACAGTTGCT GGCATTTCGA CTATTGCAAG GCTTTGGAAG CTCAGCATGT GTGATAGTGG GTACGGCAAT GATCTTCGAT TTATTCGAGG AAGAATCAGC AGCAAAACTC ATTTCAGACT TAAACACATT GGTGGTTAGT CTCATGGCTT TTGCTCCACT CATTGGTGGA TGGATCAGCT TACATATGGG CTATAAAGCA AACTTCGTTT TTATCGCAGT TCTCGTGCTT ATTTCCGCAC TCAAATGTTT CCTGTTCTTG CCAGAATCTC TCGCTGTGAA CAAAAGAAAG AAACTAGCAC CAAAGCGTAT TCTCAGTGAT TATAAGACGG TCTTATCTTC CACTGAGTTT TGGTACAACA CATTAGTCAC CAGTTTGATC CTTGGTGCCT ACATGATTTA TGTGTCAAAT ATGTCCTTGC TGTATATCGA TCAGTTGGGG GTTAGCCCAA AGCAGTTCCC GTTTTACCAA ATGGCGACAC TCGGCACATT TGTCTTGGTA AGTTTGAACA ACTCACGCTT GATAGATAAG TTCGGTGTTG AAAAGCTTAA AGCAACTGGC CTTGGACTGA TATTCGCTAA TACCCTGATA TTTTTCATAT CACCGTCGAA TTTACTGGAT TCACCAGTAT TCTTAACGGC AACCATGTGT TTGTTTTCGA TTGGTGCAGG CTTATCGATA GGTTTATTTT TTGCAAAATC AATGCAGGTA TTTCCAGAAC TCACGGGCAT TGCGGCATCT CTAGTGACAG CGATAAGACT GTTTATAGTA TCTGCCGCTA TCGATATTGG CAGTAATGCT TACAAGGGAA CATCGCAGTC AGTCGTCCAA ATCATGACGC TTGTCGTTCT CGTTTTGGCT ATCCTTTGGC TGGCGAATTA TGTGCACATG AAAAAAATGT CAGGTTTATC AGACGCCAGC TAA
|
Protein sequence | MVQRILSYNF IGICLGSSLY GPLSDHFGRR KVLIFGFSIF LTASIGCIFS TSIEQLLAFR LLQGFGSSAC VIVGTAMIFD LFEEESAAKL ISDLNTLVVS LMAFAPLIGG WISLHMGYKA NFVFIAVLVL ISALKCFLFL PESLAVNKRK KLAPKRILSD YKTVLSSTEF WYNTLVTSLI LGAYMIYVSN MSLLYIDQLG VSPKQFPFYQ MATLGTFVLV SLNNSRLIDK FGVEKLKATG LGLIFANTLI FFISPSNLLD SPVFLTATMC LFSIGAGLSI GLFFAKSMQV FPELTGIAAS LVTAIRLFIV SAAIDIGSNA YKGTSQSVVQ IMTLVVLVLA ILWLANYVHM KKMSGLSDAS
|
| |