Gene VIBHAR_06034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_06034 
Symbol 
ID5557456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp1214573 
End bp1215655 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content42% 
IMG OID640910508 
Producthypothetical protein 
Protein accessionYP_001448154 
Protein GI156977248 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00880] Multidrug resistance protein 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTCAGC GCATTTTGAG CTACAACTTT ATTGGTATCT GTCTCGGCTC TTCATTATAC 
GGTCCTCTAT CCGATCATTT TGGCCGCAGA AAGGTGTTAA TATTTGGTTT TAGCATTTTT
CTTACCGCAA GCATTGGCTG TATCTTTTCG ACAAGTATTG AACAGTTGCT GGCATTTCGA
CTATTGCAAG GCTTTGGAAG CTCAGCATGT GTGATAGTGG GTACGGCAAT GATCTTCGAT
TTATTCGAGG AAGAATCAGC AGCAAAACTC ATTTCAGACT TAAACACATT GGTGGTTAGT
CTCATGGCTT TTGCTCCACT CATTGGTGGA TGGATCAGCT TACATATGGG CTATAAAGCA
AACTTCGTTT TTATCGCAGT TCTCGTGCTT ATTTCCGCAC TCAAATGTTT CCTGTTCTTG
CCAGAATCTC TCGCTGTGAA CAAAAGAAAG AAACTAGCAC CAAAGCGTAT TCTCAGTGAT
TATAAGACGG TCTTATCTTC CACTGAGTTT TGGTACAACA CATTAGTCAC CAGTTTGATC
CTTGGTGCCT ACATGATTTA TGTGTCAAAT ATGTCCTTGC TGTATATCGA TCAGTTGGGG
GTTAGCCCAA AGCAGTTCCC GTTTTACCAA ATGGCGACAC TCGGCACATT TGTCTTGGTA
AGTTTGAACA ACTCACGCTT GATAGATAAG TTCGGTGTTG AAAAGCTTAA AGCAACTGGC
CTTGGACTGA TATTCGCTAA TACCCTGATA TTTTTCATAT CACCGTCGAA TTTACTGGAT
TCACCAGTAT TCTTAACGGC AACCATGTGT TTGTTTTCGA TTGGTGCAGG CTTATCGATA
GGTTTATTTT TTGCAAAATC AATGCAGGTA TTTCCAGAAC TCACGGGCAT TGCGGCATCT
CTAGTGACAG CGATAAGACT GTTTATAGTA TCTGCCGCTA TCGATATTGG CAGTAATGCT
TACAAGGGAA CATCGCAGTC AGTCGTCCAA ATCATGACGC TTGTCGTTCT CGTTTTGGCT
ATCCTTTGGC TGGCGAATTA TGTGCACATG AAAAAAATGT CAGGTTTATC AGACGCCAGC
TAA
 
Protein sequence
MVQRILSYNF IGICLGSSLY GPLSDHFGRR KVLIFGFSIF LTASIGCIFS TSIEQLLAFR 
LLQGFGSSAC VIVGTAMIFD LFEEESAAKL ISDLNTLVVS LMAFAPLIGG WISLHMGYKA
NFVFIAVLVL ISALKCFLFL PESLAVNKRK KLAPKRILSD YKTVLSSTEF WYNTLVTSLI
LGAYMIYVSN MSLLYIDQLG VSPKQFPFYQ MATLGTFVLV SLNNSRLIDK FGVEKLKATG
LGLIFANTLI FFISPSNLLD SPVFLTATMC LFSIGAGLSI GLFFAKSMQV FPELTGIAAS
LVTAIRLFIV SAAIDIGSNA YKGTSQSVVQ IMTLVVLVLA ILWLANYVHM KKMSGLSDAS