Gene VIBHAR_05956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05956 
Symbol 
ID5558256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp1142683 
End bp1143636 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content49% 
IMG OID640910430 
Producthypothetical protein 
Protein accessionYP_001448076 
Protein GI156977170 
COG category[R] General function prediction only 
COG ID[COG3568] Metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTCTAATA AGAACCACAT TACCTTTGCC ACCGCCAACC TATTGAACTT TGTCGCCCCT 
CCTGGCGCGT ATTATGATTT CGAGAACATT TACTCCCTCG ACGATTGGCA GGACAAGCTC
ACTTGGACCA AATCGCAGTT CGACCAACTC AATCCCGACA TCATCGGCTT GCAAGAAGTG
TTTAGCATTG AAGAAACCCA AACCTTCTTT GCAGAGATCG GTTACCAATA CTCTGCCTGT
GTCGATACAC CGCATATCGA GGGTGACTAT ATATACTCTC GTCCTGTTGT TGCCGTGGCC
TCTCGTTTTC CCATAGAGAG CTTTGAAGCG GTCACGTTCG ATAAAGATAC GCTCAATGCC
TTTGGCGATA TCGACGCGCC GCCGTTCAGC CGCAAACCCG TTCGGGCAAC CATTATTCAC
CCAATTATTG GGCATATCTG CGTGTACGTC ACGCACTTGA AGTCACAACG CCCTGCAGAC
TCAGAGACAC CAGAACAGGC CAGCAGACCC ATTGCCCGCT GGCTATCAAC ACAACAACGG
GGTTGGGAAG CTGCAATGCT GCGCGATGCA ATGCAAAAGC ACTATGCGAA TAACCCGATG
CCGACATTGT TGATGGGTGA CATGAACCAA GCCATCACTA AAACAAGCGT TAATAACGTT
TTGGTTGAAC AATACGGTGA CAGTGTCACT GACTTGCAGC TTTGTGATGG CTGGGAATTG
CAAGTGGCAC CATCGTTAGA ATCAAGACCT GCAACGCACT ACGACTTTGC GAAAGGAAAC
GTGTTGGATT ACATACTACT GTCGCAGGAG TTTGATGCGC ACGCCGATGT ATCCATAGCA
GAAGTGACGA ATTATCAAGT GCTGGATACA CACCTAATTA ACCCGTCTTT TGAGAGAGAT
AAAAACGCCA GCGACCACGC CTTTGTGGCG CTGACCGTAG AAATTAAGCT TTAG
 
Protein sequence
MSNKNHITFA TANLLNFVAP PGAYYDFENI YSLDDWQDKL TWTKSQFDQL NPDIIGLQEV 
FSIEETQTFF AEIGYQYSAC VDTPHIEGDY IYSRPVVAVA SRFPIESFEA VTFDKDTLNA
FGDIDAPPFS RKPVRATIIH PIIGHICVYV THLKSQRPAD SETPEQASRP IARWLSTQQR
GWEAAMLRDA MQKHYANNPM PTLLMGDMNQ AITKTSVNNV LVEQYGDSVT DLQLCDGWEL
QVAPSLESRP ATHYDFAKGN VLDYILLSQE FDAHADVSIA EVTNYQVLDT HLINPSFERD
KNASDHAFVA LTVEIKL