Gene VIBHAR_05949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05949 
Symbol 
ID5558411 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand+ 
Start bp1136782 
End bp1137420 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content46% 
IMG OID640910423 
Producthypothetical protein 
Protein accessionYP_001448069 
Protein GI156977163 
COG category[S] Function unknown 
COG ID[COG3714] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGCTGA TTGTCGTAGC TTGCGCGCTC ATACATATCG TCAGCATCAA AACTGGCCCT 
AAGTGGTTAT TCTTTTTGAC CAAACCGCTT CCAATCACTG CAATGATTGG GATGTTAATG 
CTGTCTCCGG CAAGTCACCT TCCCTACACC CAGTGGATCA TAGGCGGGCT CTCACTGTCG 
CTCATGGGCG ACTTAATCTT GATGCACCCA AAAGACAAAT TTCTTGTCGG CATTAAACTG 
TTTTACCTTG CTCAAATTAG CTATGCCTTG GGCTTCATCA ATATGGCGGC TTGGCATTTT 
ACTCCATGGA TTCCCTTTGC CGTATTTGGC GCAGGACTGT GTGCTTATTT CTTTTTTAAG 
CCCGATTTAG GGAAAGAAAA GTGGTCGGTG GCTAGCTACA TCTTTGTTTT GATGACCATG 
CTTTGGACGG CATTGGAATA CTACGCCAGT GGTAAAACCC GATCGTCGGC GTTCGCTGTA 
CTAGGCAGCT TTATCTTCAC CATGTCTGGG GTTGTCCTTG CCTTCGAAAG ATTTGGCAGT 
ACATCGGTAT TTTCGCGCCA AGTGGTGATG ACAACTTATT ACTCTGCCCA GTTTCTTATC 
ACCATGTCTA TCTTCGCAAT TGTGATCCGT TTTCTCTAA
 
Protein sequence
MWLIVVACAL IHIVSIKTGP KWLFFLTKPL PITAMIGMLM LSPASHLPYT QWIIGGLSLS 
LMGDLILMHP KDKFLVGIKL FYLAQISYAL GFINMAAWHF TPWIPFAVFG AGLCAYFFFK 
PDLGKEKWSV ASYIFVLMTM LWTALEYYAS GKTRSSAFAV LGSFIFTMSG VVLAFERFGS 
TSVFSRQVVM TTYYSAQFLI TMSIFAIVIR FL