Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_05816 |
Symbol | |
ID | 5557127 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | - |
Start bp | 1002313 |
End bp | 1003461 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640910290 |
Product | hypothetical protein |
Protein accession | YP_001447937 |
Protein GI | 156977031 |
COG category | [R] General function prediction only |
COG ID | [COG1994] Zn-dependent proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTTGCG TTCTATTCCA TTACAGGCAT AATTCGCACT TTGTGTTTGT CGCATTGGAA ATCGCGTTGG AATTACTACA CATTGAATTT TTAGGAAAGC CATTGAGGCT CGAAGGCTCT ATGGCAGGTT GGCAACAGCT GTTTTGGGAT AACACTCTGG TTTCACAAAT CGCAGCCAGT GATGATGAGG CTGGGAAGTC GCTGCATGAA TTTAAACTTT CATCTGGTGA GGAAGTTCTG CATTGCCAAT TGAGCTGTGA ATTAAACTGG CAACCGTTTG ATTTTAAATA CCAAGCGAGC GTCAATGAAA CGCTTGTAAC TGAAGGGCAT CGTGACGAGA AAGACATCGA ACGCCAAGTA CCAGTTGAAG CGCCACCAGC AGAAAAACGT TTTAGCTTGA TAGGCCTCGT CTCGCTTGGA ATGAAAGCGC TAAAAAGCGC CAAAGTGATC AAGGTTGCGT TAGCATCCGC AAGTTTGGCT GCCTATTCTT GGTTGTTTTC AATTGAGTTT GCGCTGGCTT TGGTTGCGTG TCTGGTATTC CACGAATATG GTCATATCCG TGCGATGAAG TACTTTGGCA TGAAGACGAA AGGCATTTAC TTAATTCCAT TCTTGGGCGG CTTGGCGCTG AGCGATGAAA AGATAAACAC GCGTTGGCAA GATGTGGTTA TCTCCATCAT GGGGCCGTTC TTTGGTTTGG TGCTCAGCAT TGTGTTCACT GTCTTGTATT GGATAACCGG TGAGATGATC TTTGCAGGGT TGGCCGTATT TAACGCCTTG TTAAACCTAT TCAACCTATT GCCAATCTTG CCGTTAGATG GCGGGCATGT ACTTAAAAGC ATAACCTTTT CAATGAACAC ATGGATAGGT TTGGCCGGTA GTATTGTCAC GGCGTTGCTC GGTATCTACA TCAGCTATAC CTTCGGCTTA ACACTGCTTG GTTTCTTGTT GATGATGGGA ATGCTCGAAG TGGTAATGGA ATGGCGAACT CGCCATCATA GCCACTTATT GCCGTTAACA CGTTATGGTC AGCTGTTTTC GTTTGCGTGG TACTTGGTAT CGGTTGGCGG TTTTATCGCC ATCATTTGGT ACTTCGCAGG GTTAGGCGAT AGCTTGTTAA GTTTGCCTCT GCAGATCCTC GGCACTTAA
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Protein sequence | MVCVLFHYRH NSHFVFVALE IALELLHIEF LGKPLRLEGS MAGWQQLFWD NTLVSQIAAS DDEAGKSLHE FKLSSGEEVL HCQLSCELNW QPFDFKYQAS VNETLVTEGH RDEKDIERQV PVEAPPAEKR FSLIGLVSLG MKALKSAKVI KVALASASLA AYSWLFSIEF ALALVACLVF HEYGHIRAMK YFGMKTKGIY LIPFLGGLAL SDEKINTRWQ DVVISIMGPF FGLVLSIVFT VLYWITGEMI FAGLAVFNAL LNLFNLLPIL PLDGGHVLKS ITFSMNTWIG LAGSIVTALL GIYISYTFGL TLLGFLLMMG MLEVVMEWRT RHHSHLLPLT RYGQLFSFAW YLVSVGGFIA IIWYFAGLGD SLLSLPLQIL GT
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