Gene VIBHAR_05796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05796 
Symbol 
ID5557324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp983404 
End bp984096 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content44% 
IMG OID640910270 
Productallophanate hydrolase, subunit 1 
Protein accessionYP_001447917 
Protein GI156977011 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2049] Allophanate hydrolase subunit 1 
TIGRFAM ID[TIGR00370] conserved hypothetical protein TIGR00370 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCAAG GGCAGTTTTC TATCTCTCCC ATTTCTGAAT GCAGCATCTT AATTCGATTC 
GACGACACCA TTACTGTCGA ACATATTGGT GAATTAGCGC ATCAGATTGT CGATAAGCTC
AAACTTATTG TTATGAACGT GGTTCCTTCT TATCGAACCA TATTGATCGA TTACTTGCCC
TTTAGAATTC AAGAATCCAC GATTCTGCAG GATCTCAATC AAATCGTCAG CCGGTTTGAT
GTCCAGTCAA TGGCCAACAA GCAACCGAAC TATATTTCTA TCCCCGTTTA TTATTCGCAA
GAAACCGCTC TAGATTTTGC GCGCTTCGAA CAAAACGGAT TATCGATGAA TCAACTCATT
GAGTTACATA CTAAACCAGT TTATACCGTT TCGGCGATTG GGTTTGCCCC TGGGTTTGCT
TTTCTCTCTG ACGTTACCCA AAAGCTGCAA ATGCCAAGGC ATCAAACACC TCGAACCCAT
GTTCCTGCGG GCAGTGTTGC CATTGCTGAC AGTAAAACCG CAGTCTATCC AGCAGACAGC
CCTGGTGGGT GGAATATCAT AGGCCGCACG CCAATTTCGC TATTCACTGA TACCCCTCCC
TTCATTCCAT TTGAGGTGGG TGACAAGGTC ACGTTTGGTT CGATATCCAA GCAGGAATTT
GTGAATTTAG GAGGCGTTTT ATGCGCTTCG TAG
 
Protein sequence
MNQGQFSISP ISECSILIRF DDTITVEHIG ELAHQIVDKL KLIVMNVVPS YRTILIDYLP 
FRIQESTILQ DLNQIVSRFD VQSMANKQPN YISIPVYYSQ ETALDFARFE QNGLSMNQLI
ELHTKPVYTV SAIGFAPGFA FLSDVTQKLQ MPRHQTPRTH VPAGSVAIAD SKTAVYPADS
PGGWNIIGRT PISLFTDTPP FIPFEVGDKV TFGSISKQEF VNLGGVLCAS