| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_05654 |
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| Symbol | |
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| ID | 5557958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009784 |
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| Strand | + |
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| Start bp | 861821 |
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| End bp | 864877 |
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| Gene Length | 3057 bp |
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| Protein Length | 1018 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640910130 |
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| Product | DNA repair exonuclease |
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| Protein accession | YP_001447784 |
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| Protein GI | 156976878 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0419] ATPase involved in DNA repair |
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| TIGRFAM ID | [TIGR00618] exonuclease SbcC |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACCCA TTAAACTGAC AATGCAGGCT TTTGGTCCGT TTGCTCAAAC AGAAACGATT
GAATTCGACA AGCTGGGTAC TAACCCTCTG TTTCTTATCA ATGGTCCTAC TGGTTCGGGT
AAAACCTCGA TTCTCGATGC GATTTGTTTT GCTCTCTATG GTGAAACGAC GGGTAATGAG
CGCCAAGGTA TTCAAATGCG TTGCGATATG GCAGCACCAA CGTTATTGAC CGAAGTGACG
CTAGAGTTCT CTTTACACGG CAAGTCTTAT CGAGTGATTC GCTCACCAGA ACAAGAAGCA
CCAAAGGCGC GTGGTGAGGG CATGACGGTG CGTAAGCATA CCGCAGCTTT GTATGAGGTT
ACGGACGAAG AAAAGCTCAT CACCAGCAAA ACAACGCAAG TAAAGACAGA AGTGACCAAT
ATCGTTGGCT TGAACGAAAC TCAGTTCCGC CAAGTGATGG TGTTGCCACA AGGAAAGTTT
CGAGAGTTGT TACTTGCGAC ATCCAAAGAG CGGGAAGAGA TCTTTGGTCA GCTATTCCAA
ACGGATATCT ACAAGAAGAT TGAATACGCA CTGAAAGACA AAGCGAGTAC TATTAGCAAA
GCCAAAGACG AGTTTGATAA CCAAATTCGA GGCGCACTTC AGGTGGCTGG TGTTTCTTCA
GAAGCGGAGT TGACAGAGCA GCGCGAAGCC TTATCTGTTC AATTTGAATC TGTACAAAAG
CAAGAGCAAG AATCTCTGGC GCAATTAAAT GCGGTAAAAA CGGAACTGCA AAAAGCAGAA
GCATTGAGCA ATGAGTTCAA AAAGCGCGAG CAAGCCGAAA TTGCATTGAA GCGACATTTA
GAACAGAGCG ATGCTGTCTC ATCACGTCAA TTGCAGTTAG ACAATGCGAA GAAGGCAAGC
AAGGTTGAGT TGCCTTATGT CACGTTACAA AATGCCTCAA AGCAAACGCA AGAACTTGAG
CAAAAGGTGG CTAAGCTTTC TCAAGATCTT ACTGTGGCAA ATGACGCGGT AAAATCCAAA
GAAGGCGCAT TGCAAACCGC GAAAGAACAA GCCGCTCAAT TGCCAAAACT GACAGAGCAG
CAATACCAAC TTGAAGGCAT GAAAGGAAAG TTGGTTGAAA AGTCAGAGCT AGAGAAAGCC
ATTAACGCAG GTTTGACGCA AAAGTCGGAG TTTGAGGCAA CGCTTAAGAA ATATATCGCT
CTGAAAGAGA AGTTAACGCT AGAGGCGCAA CGAGGTCAGA AGTCTCTGGA TCAAGCCCGA
GTCGATGTTG CAAGTATTGG CAGTGTAGAG GCTGAGATAA AACAGCAACA ACGTTTGATG
CAAGACCTAC AGAAACTAAC TGGCTTAAAC CAAGAGCTAG CGAAATTGGA TGCATTGACG
CCTAGCAAGC AAGCTTTGTT TGACCAAGCA AAAGCGCGAT ACGTAGAACT TCAACGCTCA
GCAGATACAC TTGAATTGAG CTGGCACAAT GCTCAAGCTG CTGTATTGGC TCAGCGCTTA
CAAGCCGGTG AAATGTGTCC AGTATGCGGT AGTGTAGAAC ACCCTCAACC CGCTCAATTT
GTTGGTGAAG AGGTAACAAA AGAGCAAGTT CAGCGTGCTC GAAATACGGA GCGAGAAGGG
CAAGTTGCGC TTAACCAATT GAGCAATCAA TTGGAGCAGC ACAATATCGC AGTCGGACAA
TACAAACAGC AGATAGAGCA ACTATCCGTT GAACTTGGCC AAAACGCATC GATGGATTTA
AGCGCGTTAC AAGCGTCCAT GCAGCAGCTC AATGAACGTT TACAGCAATT GTCATCGATT
AACTTGGTTC AGCTGGAACA AAGTGTCAAT GAGTTAAACC AGCGTTGTGT TACTGGGGAA
AGTAAGATCA ATGATCTGCA AAACCAGATG GCAGCGAATG AATCGACGAT AAAAGGGAAC
CAAGAGCAAC TGGCTAAACT GTCTGCTTCG TTAGATGCCA AGTACTCATC TCTTGAAGTT
CTTGAGCAAG ACATTGTTGT GATTCAAAAA CAGATTACGG AGTTGAATAC CGCATTCGAG
TCTGCACAAA ACCATTTACA ACAAGCCGTG CTGGCGAAGA CCAATATTGA AAGCCAACTG
ACAACCAATC AACAGTGGTT GAATGAGGCA CTAGAGCGTT TGAACACAGC CAAAACTGAT
TGGGCGCAAT CGTTGCAGGC GAGCGCATTC GAGGATGAAG CACAATTCCT AGCAAGTAAA
GTTGATGAAG CTGAGATGCA GGTTTGGCAG CAAGAAATTG AGGCGTTCAA ACAGACTCAA
ATCAAGCTAG AACAAACCTT GGCAGACTTG AGCTCCACGT TGAAAGACCT GGCGTTACCT
GATTTAGAAG GGTTTAACGT TAAATTAAAC AGTGTCCAGC AAAGTTACGT TGAAGCGCGT
AATCAGCTTG ATAGCACGCG CTCTTTGTTT GAACGTCTAG AGAAAGTCCG TAATGACATC
GCGACGTTAC ATGACAAGAA CACCAAGTTA GAAGACGAAT ACAAAGTGTT TGGCACCTTG
TATGACGTTG CAAGCGGTAA AACGGGTAGC CGTATCAGTT TGCACCGATT TGTCCTTGGT
GTGTTATTAG ACGACGTGTT GATTCAAGCG TCACAGCGTT TAAGCCTGAT GAGCAAAGGC
CGTTATATCT TGGCTCGTAA AACTGAAGGC TTCAAAGGTG CGGCAGGGCG AGGCTTGGAT
TTGGTAGTAG AGGACAGCTA CACAGGTAAA ACGCGCGATG TTGCGACGTT ATCAGGTGGT
GAATCTTTCA TGGCAGCGTT GGCATTAGCG CTCGGTCTAT CTGATGTTGT GCAGTCTTAC
AGTGGTGGTA TTCGCTTGGA TACGCTGTTT ATTGATGAAG GTTTTGGCAG CTTAGATCCG
GAATCATTGG ATCTTGCGAT TCAAACCTTG GTCGACTTAC AGCAAACGGG TCGCATGATT
GGCGTGATTT CTCACGTATC TGAACTGAAA GAGCAAATGG CACAGCGTAT TGATGTTGAA
CCATCGCGAC TTGGTTCTAC AGTTTCTGTG AAGTCTCAGA TGGCATTTGA TTCTTAA
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| Protein sequence | MKPIKLTMQA FGPFAQTETI EFDKLGTNPL FLINGPTGSG KTSILDAICF ALYGETTGNE
RQGIQMRCDM AAPTLLTEVT LEFSLHGKSY RVIRSPEQEA PKARGEGMTV RKHTAALYEV
TDEEKLITSK TTQVKTEVTN IVGLNETQFR QVMVLPQGKF RELLLATSKE REEIFGQLFQ
TDIYKKIEYA LKDKASTISK AKDEFDNQIR GALQVAGVSS EAELTEQREA LSVQFESVQK
QEQESLAQLN AVKTELQKAE ALSNEFKKRE QAEIALKRHL EQSDAVSSRQ LQLDNAKKAS
KVELPYVTLQ NASKQTQELE QKVAKLSQDL TVANDAVKSK EGALQTAKEQ AAQLPKLTEQ
QYQLEGMKGK LVEKSELEKA INAGLTQKSE FEATLKKYIA LKEKLTLEAQ RGQKSLDQAR
VDVASIGSVE AEIKQQQRLM QDLQKLTGLN QELAKLDALT PSKQALFDQA KARYVELQRS
ADTLELSWHN AQAAVLAQRL QAGEMCPVCG SVEHPQPAQF VGEEVTKEQV QRARNTEREG
QVALNQLSNQ LEQHNIAVGQ YKQQIEQLSV ELGQNASMDL SALQASMQQL NERLQQLSSI
NLVQLEQSVN ELNQRCVTGE SKINDLQNQM AANESTIKGN QEQLAKLSAS LDAKYSSLEV
LEQDIVVIQK QITELNTAFE SAQNHLQQAV LAKTNIESQL TTNQQWLNEA LERLNTAKTD
WAQSLQASAF EDEAQFLASK VDEAEMQVWQ QEIEAFKQTQ IKLEQTLADL SSTLKDLALP
DLEGFNVKLN SVQQSYVEAR NQLDSTRSLF ERLEKVRNDI ATLHDKNTKL EDEYKVFGTL
YDVASGKTGS RISLHRFVLG VLLDDVLIQA SQRLSLMSKG RYILARKTEG FKGAAGRGLD
LVVEDSYTGK TRDVATLSGG ESFMAALALA LGLSDVVQSY SGGIRLDTLF IDEGFGSLDP
ESLDLAIQTL VDLQQTGRMI GVISHVSELK EQMAQRIDVE PSRLGSTVSV KSQMAFDS
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