Gene VIBHAR_05473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05473 
Symbol 
ID5558894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand- 
Start bp685556 
End bp686158 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content43% 
IMG OID640909950 
Producthypothetical protein 
Protein accessionYP_001447604 
Protein GI156976698 
COG category[K] Transcription 
COG ID[COG3710] DNA-binding winged-HTH domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCGA TCCAGTTTTC GAACTTAACT TTAGAATGTG CAACAAGGAC GTTACGTAAT 
CAAAACGGAA ATAAAGTCGT TCTCAGGCCT CTTCCTTATG AGGTTCTTTT ATTGCTCCTG 
CAAAAAAATG GACCAGTATC CCGAGAAGAG CTTTTCAAGA CCTGCTGGGA AGGGTTGGTC 
GTGACCGATC AAGCATTAAC CAACGTGGTT TCTGGCCTAC GTCGTAACCT GCTTTCTTTA 
AAAGCCCAAA ACGCTGAAAT CAAAACTATC AGTAAAGTCG GTTATTTTAT TCAGGCCGAA 
TCCATTAAGG CCATCACGCA ACCATCACCT CAAATTGAAG AAACGGGCTC AGAAGCTGTC 
TGCGATAATC AGAGCGATGA AGCAAGCCTC ACCCATCCAA TGCGACAGAA AACCAGTACT 
ATCCTTCTAG CTGCGGTTTA TGTTGTTGGC ACCGTTGTAG CTTTGCTCAC CCTTCTAAAC 
TTAAAACCAC TTTTCGAGAA GCCAAGCTAT ATAGAAAAAG ACAACTATAA ACACCTTGTC 
GTTGGGCAAA CCAACATCTA TTTACATGAC GCCACTCCAG GTTTTTTTCG GCCGACAATT 
TAA
 
Protein sequence
MKSIQFSNLT LECATRTLRN QNGNKVVLRP LPYEVLLLLL QKNGPVSREE LFKTCWEGLV 
VTDQALTNVV SGLRRNLLSL KAQNAEIKTI SKVGYFIQAE SIKAITQPSP QIEETGSEAV 
CDNQSDEASL THPMRQKTST ILLAAVYVVG TVVALLTLLN LKPLFEKPSY IEKDNYKHLV 
VGQTNIYLHD ATPGFFRPTI