Gene VIBHAR_05418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05418 
Symbol 
ID5556588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp639991 
End bp640869 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content46% 
IMG OID640909895 
Producttranscriptional regulator 
Protein accessionYP_001447550 
Protein GI156976644 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTTAT CGCAAGTTGA AGCCTTTTGT ACCATTGCCG AATATGGCTC CGTATCGGAG 
GCCGCGCGTC AACTCGACTG CAACCGTACT AAGCTCAGTA TGGCGATAAA AGCGCTTGAA
AAAGACTTAG ACGTCGAGCT ATTTACTCGT ACGGGCAATC AACTCACGCT CTCGGAAGCG
GGGAAAGCCA TTTTTAAAGA CTGCGAAAAC TTGCTAGTAA CCGCACAGCG AATCAAAAAG
ACCTGCGCTC AAGTTTCTGA TGGCTTCAAC GCTGAGGTAT GGGTGGCGCG TGATGATTCA
CTACCAGATG AATTGTGGCA AGAACTCTCG CATACGCTGA ATAACCGCTT CCCTTCCACT
ACATTCAACC TGATTCTCGC ATCCAGTGGT GACTTGGCTA ACTTAGTCAG CACCCAACAG
GTCGACTTTG CGTTTGGTGT CGATTATGAA CGAGTAGATG ATCCGCACAT CGTTTATAAC
CCACTTGGTA AAATCCGCAT GATGTCGGTC TGCGGCTTCG ATCATCAACT CAGTAAAATG
CGTCGCGTAA CCGATGAAGA CCTGCGTAAC CAGATGCAAG CGTTGATGGT GTACTTGAAT
GAAAAAGACA ACCCGGAGCT ACACCCCTTT TCTACTCGAT ATATTGGTTT CTCCAGCTTT
GACTACATGC TGAACACCAT TTTGGAAGAA GATGCATGGG GTGTATTACC AGAGCCATTG
ATACGACACT ATTTGAGACA TCAGAAACTT GCGGTGATCA AACACACCTA TGGTTTGACG
CAAGAAGACT ACTGCATGTT CGTACCAAAC GGACAAACAG AGCACCCTGC AATGAGTTGG
CTGGCTGATA AATTAAGCGA GTATTTATTC GACTTCTAA
 
Protein sequence
MNLSQVEAFC TIAEYGSVSE AARQLDCNRT KLSMAIKALE KDLDVELFTR TGNQLTLSEA 
GKAIFKDCEN LLVTAQRIKK TCAQVSDGFN AEVWVARDDS LPDELWQELS HTLNNRFPST
TFNLILASSG DLANLVSTQQ VDFAFGVDYE RVDDPHIVYN PLGKIRMMSV CGFDHQLSKM
RRVTDEDLRN QMQALMVYLN EKDNPELHPF STRYIGFSSF DYMLNTILEE DAWGVLPEPL
IRHYLRHQKL AVIKHTYGLT QEDYCMFVPN GQTEHPAMSW LADKLSEYLF DF