Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_05418 |
Symbol | |
ID | 5556588 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | - |
Start bp | 639991 |
End bp | 640869 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640909895 |
Product | transcriptional regulator |
Protein accession | YP_001447550 |
Protein GI | 156976644 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACTTAT CGCAAGTTGA AGCCTTTTGT ACCATTGCCG AATATGGCTC CGTATCGGAG GCCGCGCGTC AACTCGACTG CAACCGTACT AAGCTCAGTA TGGCGATAAA AGCGCTTGAA AAAGACTTAG ACGTCGAGCT ATTTACTCGT ACGGGCAATC AACTCACGCT CTCGGAAGCG GGGAAAGCCA TTTTTAAAGA CTGCGAAAAC TTGCTAGTAA CCGCACAGCG AATCAAAAAG ACCTGCGCTC AAGTTTCTGA TGGCTTCAAC GCTGAGGTAT GGGTGGCGCG TGATGATTCA CTACCAGATG AATTGTGGCA AGAACTCTCG CATACGCTGA ATAACCGCTT CCCTTCCACT ACATTCAACC TGATTCTCGC ATCCAGTGGT GACTTGGCTA ACTTAGTCAG CACCCAACAG GTCGACTTTG CGTTTGGTGT CGATTATGAA CGAGTAGATG ATCCGCACAT CGTTTATAAC CCACTTGGTA AAATCCGCAT GATGTCGGTC TGCGGCTTCG ATCATCAACT CAGTAAAATG CGTCGCGTAA CCGATGAAGA CCTGCGTAAC CAGATGCAAG CGTTGATGGT GTACTTGAAT GAAAAAGACA ACCCGGAGCT ACACCCCTTT TCTACTCGAT ATATTGGTTT CTCCAGCTTT GACTACATGC TGAACACCAT TTTGGAAGAA GATGCATGGG GTGTATTACC AGAGCCATTG ATACGACACT ATTTGAGACA TCAGAAACTT GCGGTGATCA AACACACCTA TGGTTTGACG CAAGAAGACT ACTGCATGTT CGTACCAAAC GGACAAACAG AGCACCCTGC AATGAGTTGG CTGGCTGATA AATTAAGCGA GTATTTATTC GACTTCTAA
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Protein sequence | MNLSQVEAFC TIAEYGSVSE AARQLDCNRT KLSMAIKALE KDLDVELFTR TGNQLTLSEA GKAIFKDCEN LLVTAQRIKK TCAQVSDGFN AEVWVARDDS LPDELWQELS HTLNNRFPST TFNLILASSG DLANLVSTQQ VDFAFGVDYE RVDDPHIVYN PLGKIRMMSV CGFDHQLSKM RRVTDEDLRN QMQALMVYLN EKDNPELHPF STRYIGFSSF DYMLNTILEE DAWGVLPEPL IRHYLRHQKL AVIKHTYGLT QEDYCMFVPN GQTEHPAMSW LADKLSEYLF DF
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