| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_05345 |
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| Symbol | |
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| ID | 5556715 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009784 |
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| Strand | - |
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| Start bp | 575981 |
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| End bp | 577318 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640909822 |
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| Product | Na+-driven multidrug efflux pump |
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| Protein accession | YP_001447477 |
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| Protein GI | 156976571 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTCTA CTTCTTCTAA TGCCCAACCG ACGTTAGCGA AACAACTCTT TACGATGACT
TGGCCAATGC TGTTTGGCGT TCTGTCATTA ATGAGCTTCC AATTAGTTGA TAGTGCGTTC
ATTGGCCAAC TTGGTGTCCT TCCCCTTGCA GCACAAGGTT TCACTCTTCC CCTTCAAATG
GTGGTGATTG GTATTCAAGT TGGCTTAGGC ATCGCGACCA CAGCGGTCAT CTCAAAAGCA
CTCGGCGCAA ACAACGCTCG CTATGCTAAG CAGCTAGGAG GCCTAGTGCT TATGATTGGC
TCTATTGGTG TTGCGGTCTT CGACCTGCTT ATTTGGCTGC TGCGCTACCC TATCCTCTCT
CTATTGAGCG CACCAGATTC AGTTATGCCC ATCATCGATA GCTATTGGCC ATGGTGGCTA
TTGAGTTCAT GGGTAGGAGC GGTACTGTAT TTCTATTACA GTATCTGCCG AGCCAATGGC
AACACCATGC TGCCTGGCAC CATGATGATG GTCACCAGTG GTGTGAACTT AGTGCTCGAT
CCACTGTTTA TCTTTACTTT CGATCTCGGT ATCAACGGTG CCGCTATTGC AACAGTGATT
GCTTTTGGCT TCGGTATTTT AGTAGTGGCT CCTCGCGTTC AGAGGAATCA TTGGGCTAGC
TTCGAATGGC ACGATTTGAA TGTAGTTAAG AGCGTTACAT CCATCGGCAA TATCATGGGG
CCGGCAATGA TCAGCCAACT GTTGCCACCA CTTTCTTCGA TGTTGGCAAC TAAGCTACTT
GCGGGATTTG GTACCGCAGC CGTCGCTTCT TGGGCTTTGG GATCTCGCTA CGAATTCTTT
GCCATCGTTT CGGTATTGGC ATTAACCATG TCTATGCCGC CAATGGTGGG TCGATTACTG
GGTGCGAAAA ACTACGCTGA CATTCAATCG CTGATTTCTA TCGCGGTGAA ATTTGTTCTT
GGCTTCCAGC TTCTAATCGC CATCATCACC TTTGTCGCTG CTGATCCACT TGCTCTGCTT
ATGACCAGTG ATGCTGAAGT GACCAGCGTG CTTGAAATGC ATTTGATGAT TGTGCCTATC
AGCTTAGGCT CGCTGGGCGT GTGTATGTTG ATGGTGTCGA TCTGCAATGC TTTAGGTAAG
TCGTACACAG CGCTAACCAT CTCCGCACTA CGACTGTTTT TGTTCTTCCT TCCGTGCCTT
TGGGTTGGCG CGCAAATGGG AGGCATTAAA GGGCTGCTTA TTGGCGCTTG CCTAGGTAAC
CTCATGGCAG GTATCGCTGC TTATTTAACA TACCGTAAAA CCATTCATAA GCTCGTTTCT
GCTGAAGCTG CGGCTTAA
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| Protein sequence | MSSTSSNAQP TLAKQLFTMT WPMLFGVLSL MSFQLVDSAF IGQLGVLPLA AQGFTLPLQM
VVIGIQVGLG IATTAVISKA LGANNARYAK QLGGLVLMIG SIGVAVFDLL IWLLRYPILS
LLSAPDSVMP IIDSYWPWWL LSSWVGAVLY FYYSICRANG NTMLPGTMMM VTSGVNLVLD
PLFIFTFDLG INGAAIATVI AFGFGILVVA PRVQRNHWAS FEWHDLNVVK SVTSIGNIMG
PAMISQLLPP LSSMLATKLL AGFGTAAVAS WALGSRYEFF AIVSVLALTM SMPPMVGRLL
GAKNYADIQS LISIAVKFVL GFQLLIAIIT FVAADPLALL MTSDAEVTSV LEMHLMIVPI
SLGSLGVCML MVSICNALGK SYTALTISAL RLFLFFLPCL WVGAQMGGIK GLLIGACLGN
LMAGIAAYLT YRKTIHKLVS AEAAA
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