Gene VIBHAR_05344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05344 
Symbol 
ID5556739 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand+ 
Start bp574898 
End bp575887 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content46% 
IMG OID640909821 
ProductNAD-dependent oxidoreductase 
Protein accessionYP_001447476 
Protein GI156976570 
COG category[R] General function prediction only 
COG ID[COG0673] Predicted dehydrogenases and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCAAAC TTGCTGTGAT CGGGACGAAC TGGATCTCTC AACAATTTGT TGAAGCGGCG 
ATTCAGACCA AAGAGTTTTA TCTTCACGCC GTCTATTCTC GTGATGTAGA GAAAGCACGC 
GAATTTGGCT CACCTTACAA CGTAGAAGCT TATTACGATA ACCTCGATGC TTTAGGGGCG 
GATGAAAGCG TTGATGCAGT ATACATCGCG AGCCCAAACT CATTTCATGC GCCTCAGGCA 
GTGCAGATGC TCAAAGCGGG CAAGCACGTG ATTTGTGAAA AGCCGATGGC ATCAAATTAT 
TCTCTTGCTC AAGCGATGTT TAAAACGGCT GAAGAAAATA ATGTCGTGTT GTTTGAAGCC 
TTCATGTCGC CATACACTCC GAATTTCCAA GTATTAAAAG ACAGTCTACC GACGATCGCG 
CCTCTTTGTC ATGCTACGAT CAGTTACTGT CAGTACTCTG CTCGCTATCA GAAATATCTA 
AATGGTGAGA ACCCAAACAC CTTCAATCCT GATTTCTCCA ATGGCTCCAT CATGGACATT 
GGTTACTACT GCGTTGGTTC TGCCGTTGAG TTGTTTGGCG AGCCGAATAG TGTACAAGCG 
AGTGCGCATA TTTTGTCTTC TGGCGTTGAT GGTTGTGGCA GCGTGACCTT GGCTTATGAC 
TGCTTTAATG TGAACCTATT GCACTCGAAG GTGAGTGATT CACTCATCCC AAGTGAGTTC 
CAAGGTGAAC AGGGTAGTCT GCTGGTGGAT ATGATTGCTA CAGGGCGTGG TGTTGAGCGC 
ATTTTGCGTG GTGAGGACAA AGAAGTACTC ACGTTACCTC AAGAAGAGAA CCACATGTAC 
TATGAAGTGC AGGCATTTGC TAAGCAACTG AAACTGGGTT CGATTGCGCC TCAAATGAAG 
CAACGTTCAT TGACGGTCGC GAAAGTGCTA ACTGAGGTAA GAAGACAAAC AGGCGTTGTA 
TTCCCTGCGG ATAAAGTCGC ACTAAACTAG
 
Protein sequence
MFKLAVIGTN WISQQFVEAA IQTKEFYLHA VYSRDVEKAR EFGSPYNVEA YYDNLDALGA 
DESVDAVYIA SPNSFHAPQA VQMLKAGKHV ICEKPMASNY SLAQAMFKTA EENNVVLFEA 
FMSPYTPNFQ VLKDSLPTIA PLCHATISYC QYSARYQKYL NGENPNTFNP DFSNGSIMDI 
GYYCVGSAVE LFGEPNSVQA SAHILSSGVD GCGSVTLAYD CFNVNLLHSK VSDSLIPSEF 
QGEQGSLLVD MIATGRGVER ILRGEDKEVL TLPQEENHMY YEVQAFAKQL KLGSIAPQMK 
QRSLTVAKVL TEVRRQTGVV FPADKVALN