Gene VIBHAR_05335 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05335 
Symbol 
ID5556520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp567934 
End bp569196 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content46% 
IMG OID640909812 
Productinner membrane protein YjeH 
Protein accessionYP_001447467 
Protein GI156976561 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0531] Amino acid transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAATC TTAAGAAAGA CATCACGCTC ATATCTGGCA TTGGACAACT TTCCACCACA 
TTACTTGGAA CAGGGTTATT TATGATCCCA GCAATTTCTG CGGGTATCGC TGGGCATTTC
TCACTTTGGG CTTGGATTAT CTTACTCATC GCAATTTGCC CTATCGCGCT TACCTTTGCT
CAATTAGGTA AACGCTATCC TAGTGCTGGA GGCACAGCAT TTTTTGTTCG TAAAGCGTTT
AACAGTAATC TGGAAAGTAG CGTTGCGTGG CTTTTTGTAA GCGTGATTCC TGTAGCCCTG
CCAGCTGGGG TAACATTAGC CTCAGGCTTC TTAAATGAAC TGTTACCAGA ATCAATGAAT
ATCCCATTGT TCACACAGGC CTTTGTTGTC TTTTTATTAA TGCTAGTTAA CCTTCTCGGC
ACAAAGTCAT CTGGAAGACT ACAAACCGTC ATTGCTCTTA GCATTTTTGC TTTGGTTGGT
GCATTTTTAT GGAAAGGTGA TGTTGGCCCA GCCGATCTCA CCATGCCTGC CATCAAAATG
GATTCAACTT GGTCAATTGC GACAGCATTA GGCGTCATGT TTTGGTGCTT TGTTGGGATA
GAAGCCTTTG CGCATATGGG GGAGGAATTT AAGAACCCAC AACGTGATTT CCCAATTGCT
ATTATTGTTG GCTGCTTTGT CGCAGGACTC ACCTATTGGG CCTGCTCTGT CGTGATACTC
AAATTTGGCG CTTACGGCAG TGCTGAGTTC GACAATGCCT CAATTCCGTG GTTGAGTGCG
TATCTATTGG GTGATCACGC CAAATGGCTT ATTAGTGTTA TCGGTTTCTC AGCGTGTTTT
GCGAGTGTGA ACCTCTACAC TCAAAGTTTG GCGCGAATGG TGTGGGCCCA AGCAAGGGAG
CACAAACCAA CTAGCGCTAT CGCGAGAGTT TCAGTGCGAG GCGTACCAGC GAATGCCACG
TTAATCGTCG GCGCTATATT GCTTGCTTCT TGTGTTACTG GGTCGATATC AGGGCTAGAT
TTGGAGTTCT TCCTAAAGCT CGCAAACGGC ATCTTTGTTC TGGTCTATCT ATTGGCAATG
CTAGCAGCCT ACAAACTGCT CAAAGGTTGG GGAAAGGTCC TCGCAGGATT TTCTCTCGTG
TTGTGCACCG CAGTATTCAT TTGTTTGGGT TGGTCTATGC TGTACGCCGT TACTATTTTT
GCAGTGCTCT CCCTACCATG GAAACAGTGG CGAAAAAAGA ACACTCGCCG AGTGACTGAT
TAA
 
Protein sequence
MDNLKKDITL ISGIGQLSTT LLGTGLFMIP AISAGIAGHF SLWAWIILLI AICPIALTFA 
QLGKRYPSAG GTAFFVRKAF NSNLESSVAW LFVSVIPVAL PAGVTLASGF LNELLPESMN
IPLFTQAFVV FLLMLVNLLG TKSSGRLQTV IALSIFALVG AFLWKGDVGP ADLTMPAIKM
DSTWSIATAL GVMFWCFVGI EAFAHMGEEF KNPQRDFPIA IIVGCFVAGL TYWACSVVIL
KFGAYGSAEF DNASIPWLSA YLLGDHAKWL ISVIGFSACF ASVNLYTQSL ARMVWAQARE
HKPTSAIARV SVRGVPANAT LIVGAILLAS CVTGSISGLD LEFFLKLANG IFVLVYLLAM
LAAYKLLKGW GKVLAGFSLV LCTAVFICLG WSMLYAVTIF AVLSLPWKQW RKKNTRRVTD