Gene VIBHAR_05333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05333 
Symbol 
ID5556518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand- 
Start bp565733 
End bp566389 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content46% 
IMG OID640909810 
Producthypothetical protein 
Protein accessionYP_001447465 
Protein GI156976559 
COG category[R] General function prediction only 
COG ID[COG3467] Predicted flavin-nucleotide-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTATCCA ATACCAACAG AACGGAAATT AAGAAAGGCG CGCATAAAGC CATCTCTGAT 
GTCGACAAAC TGCACGCCAT CATAGATGAA AGCCTTATCG CTCATATTGC AATAACCAAC 
GAGTCTGGCC CTGTAGTCAT CCCCATGCTG GCTTGGCGTG TAGATGATTA CGTGTATACT 
CATGGTGCCA ACAACAGTCG ATTACTGCGC TCACTCAAAC AAGGAGTGCA AACATGCCTA 
ACCTTTACCT TGTTTGATGG CTGGTTACTG GCTCGAAGCG CGTTTCATCA TAGCGCACAT 
TATCGTAGCG CTGTTGTCTT TGGCCAGTTT GAGATGGTGG CGGATAACCA AGAGAAAGAC 
AGATTGCTGA ATCACTTTAT TGAACAAATC GCTCCGGGAA GAACAAAAGA CATCCGCTTG 
AGCAATGAGA AAGAACTCAA AGCAACCATG CTACTGCGTA TACCACTAAC GGAAGCATCA 
GTGAAAATCA GCAATTTTGG TGTTAACGAC GATGCACAAG ACATGGACAT TCCAGTTTGG 
GCTGGAGTCT TGCCGTACCG AACTGTTGCA GGCCCGCTGC AAGCTTGTGA AGATTTGTAT 
GAAGGCATTA AAGAGCCAGA CTACCGTCGT GCCTACCCTA ATCGCTGGCA GGAATAA
 
Protein sequence
MLSNTNRTEI KKGAHKAISD VDKLHAIIDE SLIAHIAITN ESGPVVIPML AWRVDDYVYT 
HGANNSRLLR SLKQGVQTCL TFTLFDGWLL ARSAFHHSAH YRSAVVFGQF EMVADNQEKD 
RLLNHFIEQI APGRTKDIRL SNEKELKATM LLRIPLTEAS VKISNFGVND DAQDMDIPVW 
AGVLPYRTVA GPLQACEDLY EGIKEPDYRR AYPNRWQE