Gene VIBHAR_05327 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05327 
Symbol 
ID5556627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand+ 
Start bp560044 
End bp561045 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content44% 
IMG OID640909804 
Producthypothetical protein 
Protein accessionYP_001447459 
Protein GI156976553 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACGG TTCGATTTAT TCGCGCGATG GGTATTTTAA ATATGCATAA CCTCGCGTTA 
TCTAAGTATA ATTTGAGATC CGAAGAGCTT GGCATCCCTG CATCAGTGTT TCACAACCCG 
ATGACATTGA TACCTTTGAA GGCCGTTTCG GAGTGGTATC GACGTATTGA ACAACTGACT 
GATGACCCAG ATGTGGTGTT AAGTTTAAGC CGTGGCATTG AGCTGCAAAA GCTTGGTCCG 
GTCGGACGTT GGTTATACTC AGGTAATGAT CTCGCTAGCA CCATTCGACG CGTGAATTAT 
GGCGTAAGTA ACCTTCAGTC AGGCGCTTTT TTAGCGGGTG AGCAATCAGG CAAGATCATC 
AAATGGACTT ACCACAACCC ATTTGTGGAA ACTTCGGTCA AAGTACATGA CAATATTCGT 
TGCGCGATAT TCATGACCAA GATTTTGCGT GAATTTTTGG GGCAAGATTA CAAGCCATTA 
CGTGTGATGA TTTCTGGTTC TAGGAAAAAT GGCAAACCAT ACGAAGAGTA CTTTGGCTGT 
GAGGTTGAGT GGAGTCAGCC AAAAACAGAA ATCTGGATCC CAGGAGATGA CCGCCTCGCC 
TCGCGTCAAG TAAGCAATCG TGAAGACAGC CGTCTAGCGA TGAGCTTTTC AGATTTGGAT 
GATTTGCTCA ACATGCCCGA TCCGGAAGAT GAGCTTAAAG TGATTTATGA AGTAGTGAGT 
TACAGTAGCC ATTATGGATT GCCGACATTG GAGCGTGTTT CATCTTTACT TGGGCTTTTA 
GAGCAACAGT TCCAGCGACG CTTGCACAAG TTAGGACTTA ATTTCTCTAC GGTATCTGGC 
TATGTATTAA GTAACGTTGC AGCCGGTTTA TTGATCAAAC ATGTCAGTAT AGAGGGGATT 
GCTGATCGCC TCGGATATAC CAATGTCGCG AGTTTTAATC GTATGTTCAA AAAACATCGC 
GGCTTAACTC CCAAACAATA CGCGGCTCGA TTGGAAAAAT AG
 
Protein sequence
MKTVRFIRAM GILNMHNLAL SKYNLRSEEL GIPASVFHNP MTLIPLKAVS EWYRRIEQLT 
DDPDVVLSLS RGIELQKLGP VGRWLYSGND LASTIRRVNY GVSNLQSGAF LAGEQSGKII 
KWTYHNPFVE TSVKVHDNIR CAIFMTKILR EFLGQDYKPL RVMISGSRKN GKPYEEYFGC 
EVEWSQPKTE IWIPGDDRLA SRQVSNREDS RLAMSFSDLD DLLNMPDPED ELKVIYEVVS 
YSSHYGLPTL ERVSSLLGLL EQQFQRRLHK LGLNFSTVSG YVLSNVAAGL LIKHVSIEGI 
ADRLGYTNVA SFNRMFKKHR GLTPKQYAAR LEK