| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_05259 |
|---|
| Symbol | |
|---|
| ID | 5557004 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009784 |
|---|
| Strand | + |
|---|
| Start bp | 507844 |
|---|
| End bp | 508737 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640909736 |
|---|
| Product | transcriptional regulator |
|---|
| Protein accession | YP_001447392 |
|---|
| Protein GI | 156976486 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCAGAG CCAGTTTTGA CCAACTTACT GCATTTGTCG CTGTCGCGGA GCATGGATCA
TTTAGCCAAG CCGCAAGGGT AATTGGGAAA GACAGAGCGA CGCTACACCA CCAAGTCAGC
GATCTAGAAA TTGATTGGGA TGTGATCTTG TTTGAACGCA AAGGAAGGAC ACCAGTCTTG
ACGGAGGTCG GAGCTACGTT ACTGACCCAA GCCAAACACA TTCTTTATCA AATGCAGTCT
TTAGAGCTTT CTTGTGATAG CTACTCTCAA GGGGATGTTC CGGAGATAAC GATTTGCCAC
GACATGTCGG TACCGTGTGA TGCCATAGCG GACATCGATC TGTCTTTGCG CAAGCAATAC
AAGAGTACAG CGATTCATTG GTTACATCGT AGCCGAGATG AAGCGTTAGA TATGCTTATG
GCGAAACAAG CGGATTTCGC GGTGGTACTT AACAGCGGCA AAGCGTTCCC AACCGAAGGG
ATGTCGTTTA TTAACTTGGG TTATCCGAAG TTTACTTTCT ATGCGCATCT GAAAAGTCCG
ATAGCGCAGA AACCTGTGGT GACTCTGCAG GATCTCGCGT CACATCATCA ATACATTGCA
GAGAATTTCA GTACCAGTAC ACTTGGTAAT CAACAGGTGA TGTCACCAAA TATCTCCCGA
ATCAGCAACA TTGATGTGTT GATGCGACTA TTGAAAAATT ATGGCTTTGC CTTGCTTCCT
CATCATTTAG TGCAAGCTCA TGATGAAAAG AGCGAATTTG TCCCGTTAAA CATAGACTTT
ATGGCGAACG AAGGTCGTGC AGGTTATGTA TTATTAAAGC GAGGCAATAC GTTAAGCCCT
GTACATCAAA AGCTGGTGAC GTTGGTGACC GAATGGTTTG ATAAACAGGT GTAA
|
|---|
| Protein sequence | MPRASFDQLT AFVAVAEHGS FSQAARVIGK DRATLHHQVS DLEIDWDVIL FERKGRTPVL
TEVGATLLTQ AKHILYQMQS LELSCDSYSQ GDVPEITICH DMSVPCDAIA DIDLSLRKQY
KSTAIHWLHR SRDEALDMLM AKQADFAVVL NSGKAFPTEG MSFINLGYPK FTFYAHLKSP
IAQKPVVTLQ DLASHHQYIA ENFSTSTLGN QQVMSPNISR ISNIDVLMRL LKNYGFALLP
HHLVQAHDEK SEFVPLNIDF MANEGRAGYV LLKRGNTLSP VHQKLVTLVT EWFDKQV
|
|---|
| |