| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_05253 |
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| Symbol | |
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| ID | 5557094 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009784 |
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| Strand | + |
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| Start bp | 501532 |
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| End bp | 502881 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640909730 |
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| Product | alpha-amylase |
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| Protein accession | YP_001447386 |
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| Protein GI | 156976480 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGGCT TACAGGAAAC ACAATCAACA GGTGCAAATG TTATCTTGCA CGCTTTTGAT
TGGAAGTATG CTGACATTGC CCAACGCGCA GCGGAGATCA GCGAGCTAGG TTATGGCTCG
GTATTGGTTT CTCCGCCGAT GAAAAGCGCA CAAGATGAAC GCTGGTGGCA GCGTTACCAA
CCTCAAGATT ATCGTGTTAT CGACAATGCG CTCGGTAATA CCACAGATTT TAAAAACATG
GTTGAAGCAC TCGACCGTGT AGGTGTATTG GTTTACGCCG ATGTCGTCTT TAATCACATG
GCGAACGAAG CCCATCTACG CTCGGATTTA CAATATCCGC GCCAAGCCGT GATGGACGAT
TACCAACAAA ATGCAAGCAA GTATCAAGAT CTGATTCTAT TCGGTGACTT GTCAGAACCG
CTGTTTGATG AGAATGACTT CGTTGAAGCT TTTGGCATCA AAGATTGGAA AGACAAGTGG
GAAGTTCAAA ATGGTCGAAT CTCAGGCGGT CCAACCGATC CTGGGTTGCC GACTTTACGT
GTATGCAAGC ATGTTGTTGA GCAGCAACGT ACTTACCTGA AAGCGCTTAA GGCTCTGGGC
GTGAAAGGTT TCCGTATTGA TGCCGCAAAG CACATGACGT TAGAACATCT AAAATTGGTT
TGGACCGAAG ACATCACTCA AGACGTCCAT ATCTTTGGTG AAATCATCAC AGATGGTGGC
GCGACAGAAG AAGAATATGA GCTGTTCCTA GAACCGTATT TGAAAGAAAC ACGTTTAGGT
GCATACGATT TTCCGTTGTT CTCTACCATC TTTAAGGCGT TCTCTAAGAA GGGCAGTTTT
AAGTCTTTGA TCGACCCGTA CTGTTTTGGT CAGGCTTTAT CTAACCGTCG AGCTATTACT
TTCGCGATTA CTCATGATAT TCCAAACAAT GATGTGTTCT TGGATTTAGT CATGGATGAA
GAGAACGAAT GGCTAGCGTA TGCCTACATT CTGGGACGCG ATGGCGGTGT TCCGCTTATT
TACACGGATT TGGACACCAG TGGTATCAAG GGCGTGGACG GTAAACCAAG ATGGCAGAAT
GCGTGGAAGG ACGCACGTAT GGCAAAGGTG GTGGCATTCC ATAATCTTGT TCATGGCGAG
CCAATGACGG TACTAGAAGG TAACGACGAC ATGTTGGTAC TTCAGCGCGG CGAGAAGGGC
ATCTTGGTAC TCAACAAATC TGCGCGAGCG CAATCACTGC AGCTGACAGT GAACAAGGCT
CTGGTTGATA TGATGACCGG AGAAGAAGTG CCTAGCGGTG AAGAGATTAA AGTGGCGGCG
AAATCAGCAA TGCTGCTTGT AGAAAAGTAA
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| Protein sequence | MSGLQETQST GANVILHAFD WKYADIAQRA AEISELGYGS VLVSPPMKSA QDERWWQRYQ
PQDYRVIDNA LGNTTDFKNM VEALDRVGVL VYADVVFNHM ANEAHLRSDL QYPRQAVMDD
YQQNASKYQD LILFGDLSEP LFDENDFVEA FGIKDWKDKW EVQNGRISGG PTDPGLPTLR
VCKHVVEQQR TYLKALKALG VKGFRIDAAK HMTLEHLKLV WTEDITQDVH IFGEIITDGG
ATEEEYELFL EPYLKETRLG AYDFPLFSTI FKAFSKKGSF KSLIDPYCFG QALSNRRAIT
FAITHDIPNN DVFLDLVMDE ENEWLAYAYI LGRDGGVPLI YTDLDTSGIK GVDGKPRWQN
AWKDARMAKV VAFHNLVHGE PMTVLEGNDD MLVLQRGEKG ILVLNKSARA QSLQLTVNKA
LVDMMTGEEV PSGEEIKVAA KSAMLLVEK
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