| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_05245 |
|---|
| Symbol | |
|---|
| ID | 5557153 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009784 |
|---|
| Strand | + |
|---|
| Start bp | 495849 |
|---|
| End bp | 497219 |
|---|
| Gene Length | 1371 bp |
|---|
| Protein Length | 456 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640909722 |
|---|
| Product | coproporphyrinogen III oxidase |
|---|
| Protein accession | YP_001447378 |
|---|
| Protein GI | 156976472 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTCG ATATTTATAA ATTTGACGAA TCAATCCTTG GGAGTGATAG CCCCGATCCG
TTGCGCTTTG CTTTTGTGAA AAAACACTCT GCGCATGCGG GTGGCAGTAG CATGCCAGTG
CCGCCGCCAC AACAAGGTGA CATCCTATCG AGAATCACCT CGGAAACGAC GACTAAGAAC
AATAAGCGCT GCTTATACAT TCATGTTCCA TTCTGTCGAG TGCGCTGTAC TTTCTGTAAC
TTCTTCCAAA ATGCTGCCAG CCGTAAGTTA GTCGATGAAT ACTTTGATGC TCTGATGAAA
GAGCTAAAAG AGAAAGCGGC GATGCCGTGG ACGCAAAGTG GCATCTTCCA TGCGGTTTAC
ATCGGCGGTG GCACGCCAAC GGATCTGGCA CCAGAACAAG TTCGCATTCT TGGTCAGGCC
ATTCACGATT ATTTCCCTCT AGCAGCTGAC TGCGAAATTA CACTTGAAGG TCGTATCAAC
CGATTCTCTG ACGAGTTATA TCAAGGTGCG CTAGACGGCG GATTCAACCG TTTCTCATTT
GGTGTGCAGA GCTTTAATAC CAAAGTTCGT CGCAGCGCTA AGCGTTTGGA TGATCGCGAA
GACGTATTGA ATCGCGTTAG TGAGTTGGCA AAAGAAGACA AGATCCCTGT CATCATTGAT
TTACTTTACG GCCTGCCTTA CCAAACAAAA GACGTTTTAG AGCAAGATCT TAAGGACTTC
ATGTCTACAG GCGCTCATGG TTTGGACCTT TATCAGTTAG TGGTTGGCGG TACAGCGCCA
ATGCTCAATT TGGTTGAAAA GGGCAAAATG TCGCCACCTG CAACGACACC GGAAAAAGCA
GGCATGTACG AGCTTGGTGC TAAGTTTATG GCAGAGCATC ACATGAAGCA GCTTAGCGTG
AACCACTGGG CGATCGATAA CCGTGAACGC AGTTTATACA ACAGCTTAGC GAAAACCTAT
GCAGAAGTTC TGCCTGTCGG TTGTGGCGCA GGCGGCAACA TCGGTGGTTA CGGCATGATG
CAGCACCGCA CGCTAGACAC TTACGTTAAA GCTGTAAATG AAGGGCAGAG CACCATCGCA
ATGATGATGA AGCAAAGCTC ACTAGAGCCA CTATTCGCAG CGCTGAAATC CGGCTTTGAT
CGAGGCATTG TTCAGGCGAG CAAGCTGCCA GCATTTATGG GCGAAGACAC CTTTAATTTC
CTGATGCCAC TATTCAAAGT TTGGCATGAC AAAGGTTTGG TCGAGTTACA AGAGCGCAGT
TTAGTTCTGA CGTTAGCAGG TAGCTTCTGG GCTGTGTCTT TGGCTCAAGC ATGTATTCAA
GTACTGACTT CTGAAATGAA CGAAAACGTA CCAAAAGTAT CTAACAATTA A
|
|---|
| Protein sequence | MTVDIYKFDE SILGSDSPDP LRFAFVKKHS AHAGGSSMPV PPPQQGDILS RITSETTTKN
NKRCLYIHVP FCRVRCTFCN FFQNAASRKL VDEYFDALMK ELKEKAAMPW TQSGIFHAVY
IGGGTPTDLA PEQVRILGQA IHDYFPLAAD CEITLEGRIN RFSDELYQGA LDGGFNRFSF
GVQSFNTKVR RSAKRLDDRE DVLNRVSELA KEDKIPVIID LLYGLPYQTK DVLEQDLKDF
MSTGAHGLDL YQLVVGGTAP MLNLVEKGKM SPPATTPEKA GMYELGAKFM AEHHMKQLSV
NHWAIDNRER SLYNSLAKTY AEVLPVGCGA GGNIGGYGMM QHRTLDTYVK AVNEGQSTIA
MMMKQSSLEP LFAALKSGFD RGIVQASKLP AFMGEDTFNF LMPLFKVWHD KGLVELQERS
LVLTLAGSFW AVSLAQACIQ VLTSEMNENV PKVSNN
|
|---|
| |