Gene VIBHAR_05172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05172 
Symbol 
ID5557186 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp429835 
End bp431142 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content48% 
IMG OID640909650 
Productglutamate-aspartate symport protein 
Protein accessionYP_001447306 
Protein GI156976399 
COG category[C] Energy production and conversion 
COG ID[COG1301] Na+/H+-dicarboxylate symporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTCATT TGCAACTCTC TTTACCTGTC CAACTTCTTA TTTCTGCTTT GCTTGCTTGG 
AGTGGGGCTC AAGCTATCCT TCTTCTCGTC GAGCATGGTT TTGCAGATAA ATCGCTATTG
CTGTCGAGTG ATTACTACCA AATTTTGATG TTGAGCAAAA CGGTCTACCT AGGTTTGCTC
AAGATGGTAG TGGGCTTGAT GGTATTGTTC TCCCTTGTCG AGGGTATTAC CAATATCGGC
TCAACCTTAC GCCTTAAAGC ATTGGGTGGA AGAACGCTGC TTTTCTACAG TTTCACGACT
CTAATAGCCA TCAGCTTGGG TCTTGGTGCT TCTTTGGCAT TGCCAGCATG GGAACCGCTC
AGTCAGACTA TTCCTGTTGG CAGTGATGTT CGTTTGATTG ACGAGCAAGG GGCTGGTGGG
GCTGCGATAT TGACCAATCT CGTCAAGATG GCCATGGTCA ATCCGTTTGC TGCGTTGGCG
AATGGTAACT TACTGGCGAT CGTCGTTTTC TCCTTTATGG CAGGCGTTGC GATTTTGCTT
TCAGTGCCAT CAGGTCACCC TTTACTGGCG GTGATTTCAG GGTTAAACAA AAGCATCAAC
ACCATGATTC GTGGCATCGT TAAGTTGTCT CCTATTGCTA TTTTCGCGAT CGTGCTTGAT
ATCACGTTGA CCTCGAGTGG CAATCTGATT CAGCAACTTG CGTTGTTTGC GCTGCTGGTG
TTTGTGCTTA CCATGGTGCA TGGGCTAGTC GTGTTACCGA CGATTGCTAA GGTTATGACG
GGGATTTCGC CGATTACGCT GTTTAAAGCG ATTTCAGCGC CGCTAACTAT GGCGTTCGCG
ACTTCCTCAA GTGCAGCTGC TCTGCCTCTT GCAAAGCAAA GTGCGGAAGA TAATTTAGAT
GTCTCACCAG AAGTTAGCAG TATGGTGTTG CCACTCGGTT CTGTAATGAA CATGGATGGC
ACGGCGCTAT TTGAGGGTGT TGCCGCGATT TTCTTGGCGC AACTGTTCGG TGTGGATTTG
AGCACGACTG GATTGGTGAT GATTTTTATC ATGGCTATGG TCTCTTCTGT CGGTGCTCCG
GGCATGCCTT CTGGCTCTAT GTCGGGTATG CAGTTAGTGC TGTTAGCCGC GGGTATTCCA
CTGGAAGCGA TTGCGATTTT ATTGGTGATA GAAAGACCGC TAGATACCTT CCGCACTGCC
GTTAATGTGG AGGGGGATTT AGTCGCGACG CTTGTTATCG ACCGTTGGCA AAAGAAGACG
ACGGTGGATT CACAATCTCT TGATTCGTCA GAGATGCTAG TGGGCTAA
 
Protein sequence
MRHLQLSLPV QLLISALLAW SGAQAILLLV EHGFADKSLL LSSDYYQILM LSKTVYLGLL 
KMVVGLMVLF SLVEGITNIG STLRLKALGG RTLLFYSFTT LIAISLGLGA SLALPAWEPL
SQTIPVGSDV RLIDEQGAGG AAILTNLVKM AMVNPFAALA NGNLLAIVVF SFMAGVAILL
SVPSGHPLLA VISGLNKSIN TMIRGIVKLS PIAIFAIVLD ITLTSSGNLI QQLALFALLV
FVLTMVHGLV VLPTIAKVMT GISPITLFKA ISAPLTMAFA TSSSAAALPL AKQSAEDNLD
VSPEVSSMVL PLGSVMNMDG TALFEGVAAI FLAQLFGVDL STTGLVMIFI MAMVSSVGAP
GMPSGSMSGM QLVLLAAGIP LEAIAILLVI ERPLDTFRTA VNVEGDLVAT LVIDRWQKKT
TVDSQSLDSS EMLVG