Gene VIBHAR_05165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05165 
Symbol 
ID5557260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp417833 
End bp418681 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content44% 
IMG OID640909642 
Producthypothetical protein 
Protein accessionYP_001447298 
Protein GI156976392 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0668] Small-conductance mechanosensitive channel 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGAAAG TGCAGTTAGT CGTCGGTTTT CTTCTCACTC ACAAAATTTT ATTTTCCGCA 
TTAATCCTGC TGTTTATCAT TGTTCTGCGT CGTTTGATTC TGTCTCGAAT TCGTGGCGAC
GATGCTTTCA TTACGGAAGA ACAACGCAGT TGGATGTCGA GAACCAAAAA CGGCACATTT
GCTCTCACTT TGATTCTGCT GTTCATCTTA TGGCAATCAG AAATTAGCGA GTTTGCCCTA
AGCGTTACGG CGATTGCAGT GGCGATTGTT GTCGCATCCA AAGAGATTAT TCTTTGTTTT
ACTGGTTCGA TTCAGCGAGC CAGTTCGCGT TCATTCCGCA TTGGTGATTG GATTGAAGTC
GGCAAGCTGT GTGGTGAGGT TATTGAGCAC AACATGATGG CGACAGTGAT TCAAGAAATC
GACCTGCATC ATGGGCAATA CCACTTCACG GGGAAAACCG CGACGTTGCC CAACAGCATG
TTCTTTACCT ACCCAGTGAA GAACCTCAAC TTTATGAAGC GTTACGTTTA CCATGACTTT
TCTGTTGTGG TGAAAGACTT CGTCAATCTC TACCCACTTT TGCCTTTACT GACCGATAAG
ATTGATGAGC ATTGCAGTTA CTTTGCCGAT GTTGCTCACC GTTATAACGC GATGATCGAG
AAGCACGCTG GTGTCGATCT TCCGGGGGCT GAGCCGCATA TCCATATATC AAGCAACATC
AATGGTGAGC AAATCGTGCA TATCATGATT TTCTGCCCAA CTGACAAGGC AAACCATTTA
GAACATCTGA TTCGCAAAGA CTTTATGGAG CTTTATGAGC AACGATTTCC AATGAATTCG
AAGCATTAA
 
Protein sequence
MEKVQLVVGF LLTHKILFSA LILLFIIVLR RLILSRIRGD DAFITEEQRS WMSRTKNGTF 
ALTLILLFIL WQSEISEFAL SVTAIAVAIV VASKEIILCF TGSIQRASSR SFRIGDWIEV
GKLCGEVIEH NMMATVIQEI DLHHGQYHFT GKTATLPNSM FFTYPVKNLN FMKRYVYHDF
SVVVKDFVNL YPLLPLLTDK IDEHCSYFAD VAHRYNAMIE KHAGVDLPGA EPHIHISSNI
NGEQIVHIMI FCPTDKANHL EHLIRKDFME LYEQRFPMNS KH