Gene VIBHAR_05107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05107 
Symbol 
ID5557850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand- 
Start bp344150 
End bp344989 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content44% 
IMG OID640909584 
ProductABC-type cobalt transport system permease component CbiQ 
Protein accessionYP_001447240 
Protein GI156976334 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0619] ABC-type cobalt transport system, permease component CbiQ and related transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGACA ACAAGATGAA GTTTGGTATC AACTACATCG ATACCCAATC GCCACTGCAC 
AAACTCAATG GCATCACCAA GTTTTTGATG TTCATTGCAT GGGTAACGGT GGTACTTACG 
ACCTTTGATT TGCGCATCAT TGCTCTACTG ATCGTTGTAG GTCTTGGTTT GTTAAAAATG 
ACCAAGATAC CTTTCCATGT GTACAAGCCT TTACTGATCG GTACAGGCAG CGTTTTGTTG 
ATTAATGCTC TGTTTATGTT CGCATTAGCA CCGCAACAAG GCGGTGAATA CATGGGCTCA 
ACAACAGTAT TGTTGTCGTT ACCGGGTAAT TACTCACTCA CCCAAGAGAC CTTGTTCTAT 
CTGGTCACCG TGACACTGAA ATACTTCAGT ATGTTCCCAA TTGCCTTGGT TTTTGTGTTT 
ACTACGCACC CTACTGAGTT TGCAGCAAGT TTGAACCGCA TGGGTGTGCC TTACAAAATC 
GCCTATGCAG TAAGTTTGAC CTTGCGTTAC TTGCCAGAAG TGAAGAAAGA CTTCGTCAAT 
ATCATGCATG CTCAACAAGC TCGCGGTGTT GAACTGAGTA AGAAAGCGCC GTTGTTTACG 
CGAATGAAAA ACGTTTCTAA GATCTTAGGC CCTTTGATTT TCTCTAGCCT AGATCGCGCT 
GACCAAATCT CTAACGCGAT GACATTGCGT GGTTTTGGCC GTCATTCTTC TCGTACTTGG 
TACAGCCTAA AGCCGCTGAC CAAAGCCGAT ATGGTGTGTA TGGCAGGCAT CGTCGTGATT 
GTTGCCACAG CGATTAGCAA ACGCGTTATA GACACTCAGC TGTTTTGGTA TCCGTTCTAA
 
Protein sequence
MKDNKMKFGI NYIDTQSPLH KLNGITKFLM FIAWVTVVLT TFDLRIIALL IVVGLGLLKM 
TKIPFHVYKP LLIGTGSVLL INALFMFALA PQQGGEYMGS TTVLLSLPGN YSLTQETLFY 
LVTVTLKYFS MFPIALVFVF TTHPTEFAAS LNRMGVPYKI AYAVSLTLRY LPEVKKDFVN 
IMHAQQARGV ELSKKAPLFT RMKNVSKILG PLIFSSLDRA DQISNAMTLR GFGRHSSRTW 
YSLKPLTKAD MVCMAGIVVI VATAISKRVI DTQLFWYPF