Gene VIBHAR_05042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05042 
Symbol 
ID5557782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp287548 
End bp288735 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content53% 
IMG OID640909520 
Producthypothetical protein 
Protein accessionYP_001447176 
Protein GI156976270 
COG category[S] Function unknown 
COG ID[COG3299] Uncharacterized homolog of phage Mu protein gp47 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACTGATA TTCCAAAACC CAACTTTGCT GAGCTGGCCA AAAAAGCGGG GTTACCGCTT 
GAGGCGTCAG AGTGGAAAGC AACGCTAAAA GAAGAAGCGG CGAAGCAAGG CAGCACCATT
GCTAACGACT CTCAATATTC GCCATTTTGG CGCTTGATTG AAACCATGGT GATTGGGCCG
ACGGTGTGGT TGGTGAACCG CTTTTTGGTG GGGGACGTGT TGCCCAACAT GTTCGTGGCC
ACAGCCAAAG ACAAATGGCT CGACCTGTGG GCGTGGCAGT TCAACGTGAA GCGCAAACCT
GCCACCAAAG CCGTTGGGCA GATCGTGATT TCCCGAGCGG CGCAGCAAGG GCCAGCGATA
GTAGTGCCCA AGGGCACGAT GATACAAACC GATCCGATTA ACGGCGCGGT TTATCGAGTG
ATACTCAGCC AGGACACGAC ATTACCGGAA AACGCAGCTT CAATCATTGG CAGAGTTGAG
GCCGAACACC AAGGCGCCGC CTTTAACTTA GGCGAAGGCT ACTTCCACGT CTTAACGTCG
GCGGTTCCAG GTATTAGCCG TGTGGTGAAC TCTGCTGGTT GGTTGATTGA AGCGGGCGCG
GATGAAGAGA GTGACGACCA GTTACGAGTA CGTATCCGCA ATCAATTCAG TAGCGTTGCG
AAATGGCACA TCGATGCGGC GTATCGCTCA TTGCTGATGC TGCGCGCCGG CATCAACAGC
GAAAACATTT ACTTCGAGCA TAACGCGCCA CGAGGGCCAG GCTCGGCCAA CGCTTATATT
CTGTTCGACT CGGGTGAGCC ATCGCCGCAA ATGCTGGCAG ATTTAAACAC GCACATCAAC
CAAGAAGGCA ATCATGGCCA TGGCGATGAT CTTAAGGTGT ACGCCATGCC TGGTAATAGC
ATCACGGTGA CGTGTCGAGT CTGGGTGGCG CGTCTGTTAT CCGATGAAGA AAGCGTGCAA
CTAAAAGCGA ACATGGCGCT GTTTATTGGC TCGGCCTTTA GGCAAAACAC CGATTATCAG
GCGACCAAAA CCAAGCCTTC CTCGCGCTTT AGTTTTTCGA AGTTAGCGCA AGAACTGCAC
GGTGAGTTTC CAGTGTTGGC GTCGATTGAG TTTGATAATG CGGACCTGTC CAATGGCATG
GAAGTGCCAA AGCTTGGGCA TTTGGAGATC ACCATTGAAG CAGCCTAA
 
Protein sequence
MTDIPKPNFA ELAKKAGLPL EASEWKATLK EEAAKQGSTI ANDSQYSPFW RLIETMVIGP 
TVWLVNRFLV GDVLPNMFVA TAKDKWLDLW AWQFNVKRKP ATKAVGQIVI SRAAQQGPAI
VVPKGTMIQT DPINGAVYRV ILSQDTTLPE NAASIIGRVE AEHQGAAFNL GEGYFHVLTS
AVPGISRVVN SAGWLIEAGA DEESDDQLRV RIRNQFSSVA KWHIDAAYRS LLMLRAGINS
ENIYFEHNAP RGPGSANAYI LFDSGEPSPQ MLADLNTHIN QEGNHGHGDD LKVYAMPGNS
ITVTCRVWVA RLLSDEESVQ LKANMALFIG SAFRQNTDYQ ATKTKPSSRF SFSKLAQELH
GEFPVLASIE FDNADLSNGM EVPKLGHLEI TIEAA