Gene VIBHAR_04981 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_04981 
Symbol 
ID5558360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp238284 
End bp239207 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content43% 
IMG OID640909460 
Producthypothetical protein 
Protein accessionYP_001447116 
Protein GI156976210 
COG category[R] General function prediction only 
COG ID[COG5006] Predicted permease, DMT superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGAAG AAAATAAACC CGTCATCTTT ATGTTGATGT CTACATTAAG CTTATCTGTT 
ACAGGACTGT TAGCAAAACA GCTCAGTGAC GATTTGTCCG TGACCATGTT CAGTTTTTTA
CGCTTCTTTA CTCCAGCTCT CCTTTTATTG GGCATGCTGC GCTTTAGGAA TCTTAAATTA
CCAACCATCG ATACCATTAA ACCGATTTTG CTTCGTGCTT TTTTCATTGG TATGTGTCAG
TTATGTTTTA TCGCATCTCT ACAAACGTTG ACTCTGGTTG AAGGGGTAGT GCTGTTCGCG
ACCGGGCCAC TGTTTATGCC CATTGTGGAG AGGCTTTTTA TGCGTGGGAA AATCCGCATG
TCGACCATAG TCGCGCTTGT GATGGCATTT TCTGGTGTCG TTTTATTAGC AGGTGCGGAT
GGTGAGTTTA CGTGGCGTGT CGACTTATTA CTGGGGCTTG CTGGTGGGTT ATTGAACTCA
GGCTCTCAAT TGACGCTATA CAAAGCAAGT AAGAGCGGTC TATCACCACT AGAAATCAAT
TTTTGGACCT TTGGTGTTGC TGCTCTACTT ATCTTACCAC TCGTGTTGGT CAATGATTCG
AGTGTGTTGG CTAACTCATT GTCGATAAAC ACGTTTGAAA CGCCCAATAC CGCACTCATA
TTCTTGATGT CATTGCTGAT TATTAATACG CAGGTATTTC GTTCAAAAGC TTATCAGCTG
GTAAGTAGTG GATCTCAATT AGCACCACTT ATATTCACCA ACCTGCTGTT TACCGCGGTG
TGGCAATGGG CGTTCTTTGA AGACCAAATG AGTGATATTC AGGTTATGGG CATCAGTTTA
ATTGTCCTAG CGACGGTAAT GAATACCTGC TGGATTCGGT TCTCGGCACG CCGTATACAT
TTACTGCGAC CTAAAACACC TTAA
 
Protein sequence
MKEENKPVIF MLMSTLSLSV TGLLAKQLSD DLSVTMFSFL RFFTPALLLL GMLRFRNLKL 
PTIDTIKPIL LRAFFIGMCQ LCFIASLQTL TLVEGVVLFA TGPLFMPIVE RLFMRGKIRM
STIVALVMAF SGVVLLAGAD GEFTWRVDLL LGLAGGLLNS GSQLTLYKAS KSGLSPLEIN
FWTFGVAALL ILPLVLVNDS SVLANSLSIN TFETPNTALI FLMSLLIINT QVFRSKAYQL
VSSGSQLAPL IFTNLLFTAV WQWAFFEDQM SDIQVMGISL IVLATVMNTC WIRFSARRIH
LLRPKTP