Gene VIBHAR_04969 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_04969 
Symbol 
ID5558042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp224479 
End bp225297 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content47% 
IMG OID640909448 
Productflagellar motor switch protein 
Protein accessionYP_001447104 
Protein GI156976198 
COG category[N] Cell motility 
COG ID[COG1868] Flagellar motor switch protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAGCA GAGTTAATGA GCCTATTTCC GACATCAAAT TGCTTGATGT AGAGTTGCTA 
GGCAAACCTA TTCATATCAT TCGTGAGAAG CTCGAAAGTT TGATCTCAGA GTCTTGTTCG
GGCCTAACCA ATGAATTACA AAATTGGCTC AGCACCAACA AAATTGAAGC GAATTTAGTT
GCCGTAGAAC TACACAGATT CTCACCAACT TTATTGGATA AAGACCAAAC CTCCACCTAT
CAACACCAAG ATGGTGGCAT GGTTTATATC TATGGAGACG CGCAAGCATT AATCAAACTG
GCCGATCGCT TTTACGGCGC CGCAACCGAG CGCACTTCCA CTTCTTTGAC GGCGAGTGAC
TTACGCCTTC AAGAGCGCAT CAGCCGAATC ATCATCAACT GGCTTGCACC GCAAGAAATG
TGGCAAACCT GCGAGTACGA GACACCACGA GGAATCGGAC TGCATGCTGA GCTTTCTATC
GCGTTTGAAG ATTTCCAAGG TGCTATTCAC CTCAAGCTCG ATAGCACCAT GATTCAAACT
TTGATCGAGC AGCTAGCCCT CCATAACGAT ACGGACTTGT ATCAGCCGTT TTGTCGCTCT
CTGGAATCTA CACCGGTGCG TCTCAATGTC GTATTGAGCA AGAAAACCAT GGCGCTGAGT
GATGTGGTCG GATTGCAACC GGACGATATA TTGCCTATCG AGCTTCTCAA CACCGTGCCA
GTAAGCATTG GTAACCAAAC TCTTTTCTCT GGCCGTGTTG CGGAACAAGA CGGCCAGCTT
GTACTGATTT TTAACCCAGA TAAGGAATCG CAGCGATGA
 
Protein sequence
MESRVNEPIS DIKLLDVELL GKPIHIIREK LESLISESCS GLTNELQNWL STNKIEANLV 
AVELHRFSPT LLDKDQTSTY QHQDGGMVYI YGDAQALIKL ADRFYGAATE RTSTSLTASD
LRLQERISRI IINWLAPQEM WQTCEYETPR GIGLHAELSI AFEDFQGAIH LKLDSTMIQT
LIEQLALHND TDLYQPFCRS LESTPVRLNV VLSKKTMALS DVVGLQPDDI LPIELLNTVP
VSIGNQTLFS GRVAEQDGQL VLIFNPDKES QR