Gene VIBHAR_04947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_04947 
Symbol 
ID5558137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand+ 
Start bp207424 
End bp207975 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content47% 
IMG OID640909426 
Productepimerase 
Protein accessionYP_001447082 
Protein GI156976176 
COG category[R] General function prediction only 
COG ID[COG0384] Predicted epimerase, PhzC/PhzF homolog 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCGCTG GCGCGGCGTT GATTGCTCAT CTAAACCAAC GCTCTGTTAA GTTGCACAGT 
AATTATGGGG ACATCACCAT TGCTAAGCAT GGTACTCAGT ACCAAATGGC TTTGCCTGCA 
TGGGATGCCA GTCCTGTTCC TGCCAGTTTA GATTTACAGT TATTAAACTT AGAGCAATCT 
GGTGTGCAAG TGTTAGATGT TGTCACTACC CGAGATCTTG TGGTGGTGTT AGCGTCTGAA 
CAGCAAGTGA AACAGTACCA GCCGGATTTT GAGCGCCTCT GCCAAATCCG AGACTTTCAT 
GCTGTGATGG TCACCGCTCA AAGTGGGCCT AACGATTATG TTTTGCGTTA CTTTGCGCCC 
AAAATCGGCA TCAATGAGGA TATCGCAACA GGGTCAGCAC AGTGCTCACT CGCTCCCTAT 
TGGTTTAAGA AGTTGGATGT AGATAACCTC AATGCGAGTC AACTTTCCTC AAAAGGCGGC 
TTTTTCCAAG TCGCGAAACT CAGCTCTGAC ACGTTAGTGA TATCTGCATC AGCGCGATTA 
AGAGAGCAGT AA
 
Protein sequence
MGAGAALIAH LNQRSVKLHS NYGDITIAKH GTQYQMALPA WDASPVPASL DLQLLNLEQS 
GVQVLDVVTT RDLVVVLASE QQVKQYQPDF ERLCQIRDFH AVMVTAQSGP NDYVLRYFAP 
KIGINEDIAT GSAQCSLAPY WFKKLDVDNL NASQLSSKGG FFQVAKLSSD TLVISASARL 
REQ