| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_04895 |
|---|
| Symbol | |
|---|
| ID | 5558234 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009784 |
|---|
| Strand | - |
|---|
| Start bp | 163242 |
|---|
| End bp | 164132 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640909374 |
|---|
| Product | transcriptional regulator |
|---|
| Protein accession | YP_001447030 |
|---|
| Protein GI | 156976124 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAATCA ATCTGGATAT GCAAAACGTC TTGGTATTAA AGCGTATGTA TGAGCTACGT
AACGTGCGTT TGGTGGCAGA ATCCCTAGGA AAAACATCTG GCGCCATCAG CAAAAATCTC
ACCAAAATGA AAGCGCAACT GGACGATCCT CTCTTCATTC AAACCAAAAG TGGTTTTGAG
CCGACCTCCT TTGTTGAAGC CAACATGCCG CACTTCGAGC AGATATTAAC CAGTGTTGAC
GCGATCAAAC CACAAGAATT TTCTCCGTCT CTCTTCACCG GAGACTTTGC TATTTACGCG
AATACACTAT TCTGGGATCG ATACGGGGAT AAGCTTTACT TGCAACTGCT AGAGCAAGCT
CCCAATGCGA ACTACTCGTT TTTAAGATGG GGAGCGGATG CACGAAACCG TATAATCGAT
GGGGAAAACG CAATCGCGAT CCACTACTTC GATGAAGATC TCCCTCAGTC CATTGCTCAA
AAAGAGCTGG GCAAGGGTAA AGCAGTGTTC TTTGTTCGAA AAGATCACCC AGCGCAAGAA
TTCCAATCCT TAGAAGATTA CACCTTCATA CTATTCAAAA CTCCCGGCTG GAACGATCAC
AAATACCCAT TATTGGATCG TTTGAAGAAC ATCGGTTTTG ACGTGAAGCC CAAAGTCGAG
ATCGAACACC CAGCAATGAT CCACAACATC ATCATGAAAA CCGATCACTT CGGTATCACC
ATGAGCGGGA ATGTGCCCGA ATGTTGTCGA AGTATCGAAC TACCAAACGG GCTGGAACTT
GGGGTTAGCT TTGTGATGAG CTGCCGTCGG TCACAACAGC ACGATCCGCA AAACCAATGG
TTGTTCAGCG TGATTCAATC CATCATTAAG CAACATTCTA AACTCGATTA G
|
|---|
| Protein sequence | MTINLDMQNV LVLKRMYELR NVRLVAESLG KTSGAISKNL TKMKAQLDDP LFIQTKSGFE
PTSFVEANMP HFEQILTSVD AIKPQEFSPS LFTGDFAIYA NTLFWDRYGD KLYLQLLEQA
PNANYSFLRW GADARNRIID GENAIAIHYF DEDLPQSIAQ KELGKGKAVF FVRKDHPAQE
FQSLEDYTFI LFKTPGWNDH KYPLLDRLKN IGFDVKPKVE IEHPAMIHNI IMKTDHFGIT
MSGNVPECCR SIELPNGLEL GVSFVMSCRR SQQHDPQNQW LFSVIQSIIK QHSKLD
|
|---|
| |