Gene VIBHAR_04874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_04874 
Symbol 
ID5558397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp142659 
End bp143474 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content50% 
IMG OID640909353 
Productphosphonoacetaldehyde hydrolase 
Protein accessionYP_001447009 
Protein GI156976103 
COG category[R] General function prediction only 
COG ID[COG0637] Predicted phosphatase/phosphohexomutase 
TIGRFAM ID[TIGR01422] phosphonoacetaldehyde hydrolase
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAACT CACCAATTCA AGCAGTGATC TTTGACTGGG CTGGCACTAT CGTCGATTTC 
GGCTCTTTTG CGCCAACCAG TATCTTTGTG GAAGCGTTCA AACAAGGCTT TGATTTTGAA
ATCGACCTTG AAGAAGCGCG CGAACCAATG GGGCTTGGTA AGTGGGATCA CATTCAAGCT
GTGGGTCGTA TTCCTGCCGT TGATAAGCGC TGGAATGAGA AGTTTGGTCG CTCAATGACC
AGCGAAGACA TCGACGCTAT CTACGCAGCA TTTATGCCGC TGCAAAAAGC AAAAGTGGCA
GACCATGCAG ACCCAATCCT TAATGCGATT GAAGTTGTGA ACGGTCTGAA AGACAAAGGC
ATCAAGATCG GTTCTTGTTC TGGTTACCCT CGCGAAGTGA TGGACGTACT GATTCCAGTG
GCAGCGGATT ACGGTTACAA GCCAGATTAC GTAGTAGCAA CGGATGACCT ACCGCAAGGT
GGTCGCCCTG CACCATTTAT GGCACTGAAG AATGTGATTG AGCTGAATGT AACTGACGTT
AATGCGTGCA TCAAAGTGGA TGACGCAGCA CCGGGCATCG ATGAAGGTCA CAACGCTGGT
ATGTGGACCG TTGGCTTGCT GCTGTCTGGT AACGAAGCAG GTCTGACGTT TGAAGAATAC
CAAGCTGCGG ACGAAGCAAC GCTTAATGCT GCTCGTGAAA AAGCGCGTGC AAAATTGCTC
AAGAGCTCGC CGCACTATCT CATCGACACC ATTGCTGACT TCCCAGAAGT GGTTGCAGAT
ATCGAACGTC GCCTAGCGGC TGGTGAACGT CCGTAA
 
Protein sequence
MSNSPIQAVI FDWAGTIVDF GSFAPTSIFV EAFKQGFDFE IDLEEAREPM GLGKWDHIQA 
VGRIPAVDKR WNEKFGRSMT SEDIDAIYAA FMPLQKAKVA DHADPILNAI EVVNGLKDKG
IKIGSCSGYP REVMDVLIPV AADYGYKPDY VVATDDLPQG GRPAPFMALK NVIELNVTDV
NACIKVDDAA PGIDEGHNAG MWTVGLLLSG NEAGLTFEEY QAADEATLNA AREKARAKLL
KSSPHYLIDT IADFPEVVAD IERRLAAGER P