Gene VIBHAR_04860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_04860 
Symbol 
ID5558201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp128415 
End bp129215 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content46% 
IMG OID640909339 
Producthypothetical protein 
Protein accessionYP_001446995 
Protein GI156976089 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATTAC TTTCGAAAGG TGATCATTTT TGTGCTGATG AACACAATGG ATTGGTCATT 
GGCGTCGCTG TCGAGGTATC GGATCATGAT TCAGGTATTC ATTTCCATGC GAAAGACCAG
TTACTTTCAT CACAACATGG TTGCATGACG ATAACGCTTG AGGACGTCAA GTATGTGTTG
CCACCTATGA GAGCAGCATG GATTCCTAAA GGGGTATCAC ACAACGCTCA GTCAACGAAT
GTGGCGCAAT ACCGTTCTCT CTATTTTGAC CCGTCGTTGA CAGAGCGTTT GCCGCGGAAG
ATTCGAATTT TCGATGTGAC GCCTCTGATG AGAATCTTGA TCGAAAGGAT GTCTTTCTGG
CCATTTGATA AACCTGAAAG TGAACAGGTC AATACCCTGA ATTTATTTAT AGAAGAGCTT
AACGATTCTG AAGATGTCTA TTTACAATTG CCGTTACCCA AAGATTATCG ATTACAGTCG
TGGATCGCGA AAATCGATGA TGAAGCGTTT ACAGCGCCTT CTTTGGCTAA GTTAAGCCAA
TGGGTTGGGG CGAGTGAAAA GACGATAACG AGGATCTTTA ATCGTGAGAC GGGGATGCCG
TACCAAAGTT GGCGTCAGCA ATGGCGTCTG CTGGGGGCCA TTGAGTTGTT ATCCAGCGGC
ATGAGGCTAT CGGATGTTGC GCATCGGTTG GAGTTTTCAA GTGACAGCGC GTTCATTTAC
TTTTTCCGCC AAAAGACGGG GATCACGCCA ATGAGTTACT TAAACAATGA GCCAAGTTTT
GGTGGGAGCC AGCTCAAATA G
 
Protein sequence
MALLSKGDHF CADEHNGLVI GVAVEVSDHD SGIHFHAKDQ LLSSQHGCMT ITLEDVKYVL 
PPMRAAWIPK GVSHNAQSTN VAQYRSLYFD PSLTERLPRK IRIFDVTPLM RILIERMSFW
PFDKPESEQV NTLNLFIEEL NDSEDVYLQL PLPKDYRLQS WIAKIDDEAF TAPSLAKLSQ
WVGASEKTIT RIFNRETGMP YQSWRQQWRL LGAIELLSSG MRLSDVAHRL EFSSDSAFIY
FFRQKTGITP MSYLNNEPSF GGSQLK