| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_04858 |
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| Symbol | malS |
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| ID | 5558353 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009784 |
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| Strand | + |
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| Start bp | 124901 |
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| End bp | 126961 |
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| Gene Length | 2061 bp |
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| Protein Length | 686 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640909337 |
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| Product | periplasmic alpha-amylase precursor |
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| Protein accession | YP_001446993 |
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| Protein GI | 156976087 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTGA ATCTGATTAC GACTACCTTA TTGCTTGCAT CGGCAAGTGC CATCGCCGAG
CCAAACATCA CCATATCTAC CACGACCAAC AGCCGTGACT TTCCTTTAAG TGCAGAGCAG
TCTTTGGTTG TGCCCTTAAC TAAAGACGGA TACACGCTCA AAATCACGGG TGTTGAAGGC
GACTGTGTCG CGCCTGACGG TCAGAAGGTC AAATTCAACA AACCTATCGC GTTGAACTGT
GGAAAGCCAA CGGAACTGCC GTTAAAAATC CGCTTCACTG GCGATTACTC TTTTGCTTTT
GATGCGGAAG CGAAAACACT TCGCTTCAAG CGAGAGCCTA AGAAAGCTGC CAAGACAGAA
TTCAAACGCC CAATCCCAAA AGTGCAATGT GAAGTTTACC AAGGTGGTGA AGTCACCATT
GCGCTGGGTG ACAGTTTCCC TGATGGCACC AAGTTGCGTG ATGCCTATTC TGGGCAAATG
GTCGAAGTAA AAGATCAGCA AGTATCGCTG ACACCAAGCA AAGACTCCGG CGGTTTGGTG
CTACTAGAGC CAGTGAAGAA AACCAAAGAA GCAGTGCCGT TTGATTATCG TAATGCCAAC
ATTTACTTCG TGATGGTGGA CCGTTTCAAC AACGCCGATA CGAGCAATGA CAACAGCTAT
GGGCGCAATA AAGACGGTAA AGAAGAGATT GGTACTTTCC ACGGTGGTGA CCTAAAAGGC
GTGATCGAAA AGCTAGATTA CATCAAGAGC CTAGGTACCG ATGCGATTTG GTTGTCGCCA
ATCGTTGAGC AAGTTCACGG CTTTGTGGGT GGCGGCGATA GCGGCTCATT CCCATTCTAC
GCTTACCACG GTTACTGGAC GCGTGATTTC ACCAAGATTG ATGAGAACTT CGGTGACGAA
GATGACCTTA AATTGCTGGT GGAAGAGGCA CACAAACGTG GCCTTAAAGT CTTGATGGAC
GCAGTAATCA ACCACACCGG TTACTCAACG TTAGCCGATT TGCAATTTGA CGGTATTGAG
GTGTTAAAAC CAAACGCTGA TTTACCGAAG AAGTGGGGCG ACTGGCAACC AAAAGCGGGT
GAAAATTGGC ATAGCTACCA CCAGAATATT GATTACCAGA GTCCAAATTG GGCGAAATGG
TGGGGCGGTG ACTGGGTAAG AACAGGTCTA CCGGGATACC CGGCTCCGGG CAGCAGTGAC
ATCACTCTGT CATTGGCGGG TTTGCCTGAC TTTATCACCG AATCAGACAA AGCCGTGAAG
CCTGCGCAGT GGCTATTGGA TAACCCCGGT ACTGGCGTAG AGGCGCGTGA CAATTACACC
GTCTCGGATT ACTTGATTGA GTGGCAAACT GATTGGGTGA AACGCTTTGG TATTGATGGC
TACCGTGTTG ATACGGTGAA GCACGTTGAA GGCGATGTGT GGAAACGTTT GAAAGAAGAA
GCTTCGAGCA GTCTTGAGCA GTGGCGTAAA GAGAACGGAA AATCGGGTCA GCCATTCTGG
ATGATGGGCG AAGTATGGGG GCATACAGCA TATCGCAGCC CATATTTTGA CGATGGCTTT
GATGCGTTGA TTAACTTTGA TATGCAGAGG AAGTTAGACA AAGGCGCGGC GTGTTTCAGC
CAAATGGCAG ACACCTACCA AAGTTATGCA AACACAATCG CTAACGAGAA AGACTTTAAC
CCAGTGAGTT ACATGTCTTC TCACGATACT GAGTTGTTCT TCTCTCGCTT TAAAGATTAC
GGCATGCAGC GTAACGCCGC GAATGCGCTG CTTTTAGGCC CTGGTGCTGT TCAGGTTTAC
TACGGTGACG AAGTGGGTCG TAACATTGGT CCATACGCGG ATGATTTCCA CCAAGGCACA
CGCTCTGACA TGGTATGGAA GCTATCGGAT GAGAAGCAAG CGCTACTCAA ACATTGGCAA
ACCCTTGGTC AGTTCCGTAA AGCGCATCCA GCGATTGGTG CGGGCCAGCA TCAAGTAATT
GAACAAGAAG GCGCGTACGT GTTCTCTCGT TCACTTGGTA ATGACAAAGT TGTCGTGGCG
TTTGTTGGTC GTGAGAAATA A
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| Protein sequence | MKLNLITTTL LLASASAIAE PNITISTTTN SRDFPLSAEQ SLVVPLTKDG YTLKITGVEG
DCVAPDGQKV KFNKPIALNC GKPTELPLKI RFTGDYSFAF DAEAKTLRFK REPKKAAKTE
FKRPIPKVQC EVYQGGEVTI ALGDSFPDGT KLRDAYSGQM VEVKDQQVSL TPSKDSGGLV
LLEPVKKTKE AVPFDYRNAN IYFVMVDRFN NADTSNDNSY GRNKDGKEEI GTFHGGDLKG
VIEKLDYIKS LGTDAIWLSP IVEQVHGFVG GGDSGSFPFY AYHGYWTRDF TKIDENFGDE
DDLKLLVEEA HKRGLKVLMD AVINHTGYST LADLQFDGIE VLKPNADLPK KWGDWQPKAG
ENWHSYHQNI DYQSPNWAKW WGGDWVRTGL PGYPAPGSSD ITLSLAGLPD FITESDKAVK
PAQWLLDNPG TGVEARDNYT VSDYLIEWQT DWVKRFGIDG YRVDTVKHVE GDVWKRLKEE
ASSSLEQWRK ENGKSGQPFW MMGEVWGHTA YRSPYFDDGF DALINFDMQR KLDKGAACFS
QMADTYQSYA NTIANEKDFN PVSYMSSHDT ELFFSRFKDY GMQRNAANAL LLGPGAVQVY
YGDEVGRNIG PYADDFHQGT RSDMVWKLSD EKQALLKHWQ TLGQFRKAHP AIGAGQHQVI
EQEGAYVFSR SLGNDKVVVA FVGREK
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