| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_04848 |
|---|
| Symbol | |
|---|
| ID | 5557172 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009784 |
|---|
| Strand | - |
|---|
| Start bp | 111697 |
|---|
| End bp | 114405 |
|---|
| Gene Length | 2709 bp |
|---|
| Protein Length | 902 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640909327 |
|---|
| Product | transcriptional regulator MalT |
|---|
| Protein accession | YP_001446983 |
|---|
| Protein GI | 156976077 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2909] ATP-dependent transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGGATTC CATCAAAACT TACTCGCCCT GGCCGCTTGC ATAATGCGAT CGTCCGCCCG
CGAGTATTGG ACTTACTACA ACAAGCGCCT TACTACAAAC TGGTACTGTT TCGCTCGCCA
GCTGGTTACG GGAAAACCAC CATGGCAGCA CAGTGGCTAT CAGATAAACC GAATGTGGGT
TGGTACAGCA TCGATGACAG TGACAACGAT GGTTTTCGCT TCGTCAACTA TTTACTGCAA
GCTTTAAACA AAGCGACCAA CTACAACTGT TCCAACGCAC AAAAATTGGC TGAGAAACGT
CAGTTCTCTT CTTTACGCTC TTTATTCAGC GAAGTTTTCG CTGAGATGGC GGATTTTCAG
CACGAGTGCT ATGTCGTTTT AGATGACTAC CATTTGATCA CTAACGACGA AATTCACGAG
TCAATGCGCT TCTTCTTAAA GCACATGCCA GACAACCTGA CAGTGGTGGT CACTAGCCGT
GCGGCGCCAC CATTGGGTAC TGCGAACCTG CGTGTACGTG ATCTGATGAT TGAAATTGGC
AACGAAATGT TGGCGTTCGA TACCGAAGAA ACTACTCGTT TCTTTAACCA ACGCATTGCT
GATGGCATCG ATGAAGATAT GGCCAATAAC CTGCGCACTT ACGTAGAGGG CTGGCCATCC
GCGCTACAGC TAATCGCACT GCAGGCGCAG CACCAGAACC GCACACTGGC ACAAACCGTA
GAATCGGTGT CTCAGTTTAA CCACGCGCAT CTGTGGGATT ACCTCGTAGA GGAAGTCTTT
GACCTTCTCG ACCAAGAAAC CCGTCATTTC TTAATGCAAG TGTCGGTGCT TGACCACTTT
AACGACGAGC TCGTGTTTGC CCTGACTCAG CGTGAAGACG CGCTAGGCAT GATTGAATCA
CTCAACCGCT TCGGCTTGTT TATCTATCCA TTAGAAGGTG AGCAAAACTG GTTCCGCTTC
CATAACCTAT TTGGTGAGTT CTTATCTCAT GAGCGCCTTG CTCGCATTCC TCAACAAGAA
AAAGACCTAC ACCGAAATGC CGCGGTTGCT TGGCTTAAGC AAAAAGCCCC TCATCAAGCG
ATTCATCACG CCCAAAAGTC CAACGACACC GACCTGATCG TAGAAATTTT GAATGAGTTC
GGCTGGAAGA TGTTCAACCA AGGCGAGTTG ACAACCCTAG AGTCTGCCAT CAACCAACTT
GATAAAGATC TGCTGTTCAG CCATCCGAAA TTATCGATGT TGCGAGCTTG GCTAGCGCAG
AGCCAACACC GCTATAACCA AGTAGGCAAA CTGCTAGCGG AAGCAGAAGA AGAGCACAAA
AAGCGTAATA TTGAGATCGA TTCTGGCTAT CAAGGCCAAG CAAATGCCCT ACTCGCTCAA
GTCGCGATCA ACAGCAACCA ACCAGAGCAC GCATTGGAAC TTGCCGAGCT TGCGCTTAGC
CAACTTGACC CAACCGTATA CCGCAGCCGT ATCGTGGCTA CGTCGGTCGT TGGTGAAGTT
AACCACGTAT TGGGTAAGCT CGATCGTGCA TTGCCAATGA TGCAACAAAC CGAAAAGCTG
GCGCGCCAGT ATCAGGTTTA CCACCAAGCG TTGTGGGCAA TCTTGCAGCA AAGCGAAATC
ATGATCGCCC AAGGCTACGT TCAAGCAGCA TTTGAACTGC AAGATTCTGG TTTCCGTCTG
ATCGAAGAAC AGCAGCTTCA GCACGTACCT CTTCACGAAT TCTTGCTACG TATTCGCGCT
CAAGTTTTGT GGTGCTGGAA CCGTTTGGAT GAAGCGGAAG AATGTGCGTA CAAAGGCCTG
CAAATTCTAG AAAACCACTC ACCAAGTAAA CACTTACACA GCTACTCAAT GTTGGCTCGT
ATTGCCATTG GCCGTGGTGA GTTGGATAAA GCGGGCAAGT TCATCGAACA TATCCAACAT
TTGATGAAGC AATCCACTTA CCACGTTGAC TGGACAGCCA ATGCCTCACT TTCTCTGATT
TTGTTCTGGC AAGCGCGTGG GAACACAGAA GCGATTCAAG AATGGTTGAA CACCGCCGTC
CGTCCTGAAT CGGCATGTAA CCACTTCCAA CAGTTGCAAT GGCGTAATAT TGCTCGTGCT
CATATCAACC TTGGTCAGTA TGATGAAGCG CGCGAAGCAC TGGATTTTTT ACAAAGCGAA
GCTCACCGTA CGAATTTGGT GACGGATACG AACCGTAACT TGGTTGTCGA AGCCATCTTG
GCAGCACGCC AGAAAGACGA AGAGCAAGCC AAAACACTGC TGAAAGAAGC ACTGGTCATG
ACAAATCAGA CAGGCATGGT AGGTAACTTC TTAACTGACG GCGCAACCAT TGGTGGTCTG
CTAGAGAAGC TGAGCTTGCG TCATGAATTG GGCGATCTAG AACGCCATCG TGCGCAACAG
TTGATGAAAG ACATTTCATC TAACCAACGC AGCCGTTCTA TTCACTTCGA TGAAGACTTT
ATCGAGAAGC TAGTCAATCA CCCGAATGTA CCAGAATTGG TTCGTACTAG CCCACTGACT
CAACGCGAAT GGCAAGTACT TGGCCTGATT TACTCTGGCT TTAGCAACGA GCAAATCGCG
CAAGAGCTGG ATGTCGCAGG CACAACGATT AAGACTCACA TTCGTAATTT GTACCAGAAG
CTCAACATTG CCAACCGTAA GGAAGCGATC GTGACAGCAG AAAACTTATT GCAACTAATG
GGTTACTGA
|
|---|
| Protein sequence | MWIPSKLTRP GRLHNAIVRP RVLDLLQQAP YYKLVLFRSP AGYGKTTMAA QWLSDKPNVG
WYSIDDSDND GFRFVNYLLQ ALNKATNYNC SNAQKLAEKR QFSSLRSLFS EVFAEMADFQ
HECYVVLDDY HLITNDEIHE SMRFFLKHMP DNLTVVVTSR AAPPLGTANL RVRDLMIEIG
NEMLAFDTEE TTRFFNQRIA DGIDEDMANN LRTYVEGWPS ALQLIALQAQ HQNRTLAQTV
ESVSQFNHAH LWDYLVEEVF DLLDQETRHF LMQVSVLDHF NDELVFALTQ REDALGMIES
LNRFGLFIYP LEGEQNWFRF HNLFGEFLSH ERLARIPQQE KDLHRNAAVA WLKQKAPHQA
IHHAQKSNDT DLIVEILNEF GWKMFNQGEL TTLESAINQL DKDLLFSHPK LSMLRAWLAQ
SQHRYNQVGK LLAEAEEEHK KRNIEIDSGY QGQANALLAQ VAINSNQPEH ALELAELALS
QLDPTVYRSR IVATSVVGEV NHVLGKLDRA LPMMQQTEKL ARQYQVYHQA LWAILQQSEI
MIAQGYVQAA FELQDSGFRL IEEQQLQHVP LHEFLLRIRA QVLWCWNRLD EAEECAYKGL
QILENHSPSK HLHSYSMLAR IAIGRGELDK AGKFIEHIQH LMKQSTYHVD WTANASLSLI
LFWQARGNTE AIQEWLNTAV RPESACNHFQ QLQWRNIARA HINLGQYDEA REALDFLQSE
AHRTNLVTDT NRNLVVEAIL AARQKDEEQA KTLLKEALVM TNQTGMVGNF LTDGATIGGL
LEKLSLRHEL GDLERHRAQQ LMKDISSNQR SRSIHFDEDF IEKLVNHPNV PELVRTSPLT
QREWQVLGLI YSGFSNEQIA QELDVAGTTI KTHIRNLYQK LNIANRKEAI VTAENLLQLM
GY
|
|---|
| |