Gene VIBHAR_03701 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03701 
Symbol 
ID5554734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp3737066 
End bp3738514 
Gene Length1449 bp 
Protein Length482 aa 
Translation table11 
GC content46% 
IMG OID640909180 
Producthypothetical protein 
Protein accessionYP_001446842 
Protein GI156975935 
COG category 
COG ID 
TIGRFAM ID[TIGR01709] general secretion pathway protein L 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTTTA AAGCAGTACT CGATAAGCTC AAGCGGTCAT CGGTTGGTGG TCGTACGTGC 
TTTTTGGTCA TTCAGCCAGA CGCAGTTTAT TTATCATCAC CAACGAAAAG CAGTCGACCG
TCCAAATTTG AAATCACAGA ATCAAATTGG GAGCGCGCTT GTGAGCAAGC ACTCAGTGTT
GCTGCCAGCT CTTACGACTC GTTGGCGGTT GTGCTTTCTC ACAACTATTA CCAGATGTAC
CAAATCGACA AGCCAGCAAT GCCACGAAAC GAGTGGCCTT CGGCGTTACC GTTCTTGTTA
AAAGAGCTTA TTTCTGAGCG TGCTATCGAC ATTATTGCTG ATGCCGTAGA ACTGCCTAAC
TCAAATAAAG TTCAAGCATA TGTGTTGTCG CGCAAAATCC TCGACAAGAT TGTACTGCTT
GCCAACCGAG TACAACTTCC ACTTGAATCT ATCATTCCTG AAGATGACAT CTGGGGTGAC
ACTTCGGGTG AATTAGGCAA CTTCCTACTT CTACAACGCA GTGCGCGCGG TCACTTCCGT
CTTAGCGCAT TCGTTGAGCA CACCATTGCA TTTCATCGTT CCATTCGCAG TGTGACGCCA
CCATTAACAG GTGTACCTTC AAGTGACTTA CAGATGGACA GTTTGTCACT GGAACTGCAA
CGATCGATAG ATTACCTCTC TTCTCAACTG CGTCATGTCC AGTTACATCA ATTGAAAGTG
TGTTGTGATG ACGAAGACGA GAAAGAGCTG GTTGAATCAC TTAATTACCG TCTAAGCACC
AAGGTGTCTC CTCTGCTTGC AGAAGAGCAT GAGCTATCAG GTCATGTATT GGCGGACACC
GCGGCGGCTA CAGCGAGTGC TCGACGCGTC AACCTTTATC CAGACTTCCT TAAACCGAAG
AAGAACCTGT TAACACTTAA AAATGTTGCT ATATCTTGTG GGGGGGCTGC TTCATTTATC
TTTATCTCTT ATGGCTATGT TACTTGGCAA AGCCGAGGCG TCGAAGATGA AATTAAGATC
GTGAAAAGCC GTGGTGACAT TATGAAGTCT GAGTTGCAAC ATCAACAGGC TAAGCTTCGC
AAGCACCAAC CAGATACCAA CAAACTGGCG GCGAAAGCAC GTTTGGAACG CGAAGTGAAA
GCGAAGCGTG ACTCACTCAA AGCTGTCGGC AAATACGATG ACTCGCAGCG CACAGGATAC
TCTGGTGTGA TGCAGTCTCT TGCTAAGTTG GGCAGCAACA ACATCTCTCT TTCTACCATT
CGTATCGACG ATACCACTTT AGATCTCAAA GGCTTGGCAA GATCGCCAAG TGCGGTGCCT
AACTGGGTGA GCCAATTTAA GAATGAAATT AGTCTTGTTG GACGTACTTT TGATGATGTG
AAGATTGGTC GTAACGAAGA CAACATTGTG ACCTTTGAAT TGAAGACGCG TGGAGACAAA
GAGAAATGA
 
Protein sequence
MDFKAVLDKL KRSSVGGRTC FLVIQPDAVY LSSPTKSSRP SKFEITESNW ERACEQALSV 
AASSYDSLAV VLSHNYYQMY QIDKPAMPRN EWPSALPFLL KELISERAID IIADAVELPN
SNKVQAYVLS RKILDKIVLL ANRVQLPLES IIPEDDIWGD TSGELGNFLL LQRSARGHFR
LSAFVEHTIA FHRSIRSVTP PLTGVPSSDL QMDSLSLELQ RSIDYLSSQL RHVQLHQLKV
CCDDEDEKEL VESLNYRLST KVSPLLAEEH ELSGHVLADT AAATASARRV NLYPDFLKPK
KNLLTLKNVA ISCGGAASFI FISYGYVTWQ SRGVEDEIKI VKSRGDIMKS ELQHQQAKLR
KHQPDTNKLA AKARLEREVK AKRDSLKAVG KYDDSQRTGY SGVMQSLAKL GSNNISLSTI
RIDDTTLDLK GLARSPSAVP NWVSQFKNEI SLVGRTFDDV KIGRNEDNIV TFELKTRGDK
EK