Gene VIBHAR_03379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03379 
Symbol 
ID5553281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp3416496 
End bp3417269 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content46% 
IMG OID640908859 
Producthypothetical protein 
Protein accessionYP_001446553 
Protein GI156975646 
COG category[L] Replication, recombination and repair 
COG ID[COG0084] Mg-dependent DNase 
TIGRFAM ID[TIGR00010] hydrolase, TatD family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAACTGT TTGATACCCA CTGCCATTTT GACTTCGATG TCTTTCAGGA TGACTTTGCA 
CATCAAGTTG AGCTTGCGCG TGACCAAGGA GTAGAGCGTA TCTTGATTCC TTCTGTCGGG
CCGAGTAACT GGGCTCATAT TCAAGCGCTG GCCAACCAAT ACTCTCACCT TTATTATGCG
CTGGGCTTTC ATCCATATTT TCTACAACCA GAGTTTGAGC AGTTTGCCCC AGAGCTGGAA
TCGTTACTTT CCTCGTCCAA GCGACAATGC GTGGCGATAG GGGAGTGCGG TTTAGACTTC
GTAATAGATG TGCCTGTCGA GCTTCAAGAG CAGGTACTTG AATTGCAATT CGAACTGGCA
AGACGGTTCG ATCTGCCCGT TATTTTACAC AGCCGAAAAG CACAGAATCG TCTCATCCAA
CTAGTCAAAG CAGCCAAGCT TCCTAAAGGT GGCGTATTGC ACGCGTTCTC TGGCAGTTAT
CAGCAAGCGA TGGAATGGGT TCGATTAGGT TTTCTTATCG GAGTCGGAGG CACAATTACC
TATCCAAGAG CCAATAAAAC TCGCGACGCG ATTCAAAGAT TATCACTTGA GAATATCGTT
TTAGAAACGG ACGCTCCGGA TATGCCTATA CTTGGCTATC AGGGCGAGCC TAATCACCCT
TCAAAACTGA TTCATGTATT GAATGAGCTC TCTCTGTTGC ATACAGAAAG CAAGCGATCG
ATTGCCTCTC AGCTATGGGA AAATAGCAAT TCTGCCTTCT TTATATGTGA ATAG
 
Protein sequence
MKLFDTHCHF DFDVFQDDFA HQVELARDQG VERILIPSVG PSNWAHIQAL ANQYSHLYYA 
LGFHPYFLQP EFEQFAPELE SLLSSSKRQC VAIGECGLDF VIDVPVELQE QVLELQFELA
RRFDLPVILH SRKAQNRLIQ LVKAAKLPKG GVLHAFSGSY QQAMEWVRLG FLIGVGGTIT
YPRANKTRDA IQRLSLENIV LETDAPDMPI LGYQGEPNHP SKLIHVLNEL SLLHTESKRS
IASQLWENSN SAFFICE