| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_03353 |
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| Symbol | |
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| ID | 5552948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009783 |
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| Strand | - |
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| Start bp | 3387037 |
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| End bp | 3388386 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640908833 |
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| Product | Flp pilus assembly protein secretin |
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| Protein accession | YP_001446527 |
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| Protein GI | 156975620 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4964] Flp pilus assembly protein, secretin CpaC |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACAA AAAGGATATT CTCATTCGCT TGGTTTTTGG TGTTTTTATT TAGTTTCTCC
GCTTTCTCTG GCGATCGTTA TATCACGGTC AGTGATGGGC AACACATTGA GGTGAAAGAA
CCGATCTCGA CCGTATTTGT GAGTGACCCT GAAATCGTCG ACTACAACGT TGTAAATGAA
AATACTGTCG TTGTTTTTGC TAAGGAGGTC GGACAAGCCA GATTCATCAT CTACGGTAAA
TCGAAGAAAG TGCTGCTCTC TGACCGAATT ATTGTCGATA TTGACCTGTC GTTGGTCCGA
CGTCAAATCA AGCTTCACTA TCCCGAACTC AACATCAAAG TAGAATCGGT TGGTAATCAG
GTCGCAGTGA GTGGTGTAGT GGAATCGGAG CAGCAACGTG ATGATATTTA TCGGATGGTT
GCTACTCTAC TTGGAAGAGA CAAAACGGAG AAGTGGGAAG AGACGCAGGT CTTAGAGTTC
GAGAATGAGG CATATGACAT CGAAGAGCCT CAAAGCATGA TTTTCGCTCG AAATATGACG
TGGGAAGGCA TCCTAGAGCT CATAGAAGTG GCGACTGATC AACAAGTCAA TGTGAAAATA
TCGGTCGCTC AAGTGACAGA AACGTTCTCC CAAACTGTAG GTGTGGATTG GTCTTCTGTT
GGTGCGGATG TTGGTGAGTT TTTATTCCAA CAATTTGATG CTGCTGACCT CACCACTTTG
ATCACTGCGC TTGGCAATGA AAATGTAGCC CAAGTGCTTG CCGAGCCAAA CCTTACTGTT
ATCTCAGGAG AGTCAGCAAG CTTTCTTGTT GGTGGTGAAG TACCCGTGAT TGTTACCACC
AATAATAATA TCAATATTAC CTTCCGAGAG TTTGGTATCA AACTCGATCT TACCGCGAAA
GTCCTTCATG AGGGCAAAAT TCGAATGCGT CTCATGCCTG AAGTTAGCGA AGTAGAAAGA
TACATTCGCT CTGCTGGGCT AGAAGTGCCC CAATTTGCGA CTCGAAGAGC GATGACCACG
ATTGAACTTG GTGATGGCGA TAGTTTTGTA CTTGGTGGGC TGATGAGTAG TGCCGATTTA
GAAGAGCTGA AAAAAATTCC ACTTCTTGGC GATATTCCTG TTCTCGGAGC TGCGTTTCGT
AAAGCTTCTA CAGATAGACG ACGCACGGAG CTGATCATTG TTGCGACCGT TAATCTTGTC
AAACCAATGA AGAAGAAAGA CATCCAAATG CCCTACATGA GCAAAACGTC GACACTTCGC
CGTTGGTTGA AAATTTCGGA TAGTGAAGAA GGCAACAAAG GCAATGACCC AACCATTCAA
TTGCTGTCTC AGGGAGGTTT TATTCAATGA
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| Protein sequence | MKTKRIFSFA WFLVFLFSFS AFSGDRYITV SDGQHIEVKE PISTVFVSDP EIVDYNVVNE
NTVVVFAKEV GQARFIIYGK SKKVLLSDRI IVDIDLSLVR RQIKLHYPEL NIKVESVGNQ
VAVSGVVESE QQRDDIYRMV ATLLGRDKTE KWEETQVLEF ENEAYDIEEP QSMIFARNMT
WEGILELIEV ATDQQVNVKI SVAQVTETFS QTVGVDWSSV GADVGEFLFQ QFDAADLTTL
ITALGNENVA QVLAEPNLTV ISGESASFLV GGEVPVIVTT NNNINITFRE FGIKLDLTAK
VLHEGKIRMR LMPEVSEVER YIRSAGLEVP QFATRRAMTT IELGDGDSFV LGGLMSSADL
EELKKIPLLG DIPVLGAAFR KASTDRRRTE LIIVATVNLV KPMKKKDIQM PYMSKTSTLR
RWLKISDSEE GNKGNDPTIQ LLSQGGFIQ
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