Gene VIBHAR_03347 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03347 
Symbol 
ID5553117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp3382297 
End bp3382860 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content37% 
IMG OID640908827 
Producthypothetical protein 
Protein accessionYP_001446521 
Protein GI156975614 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2064] Flp pilus assembly protein TadC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATTAA TTAATAAGTT ATTAGTTTCA ATCATTGCTG TTATTAGTAT CATCATTGTT 
CCAGATCTGT TGCTCGAGAT GCGAAAGCGC ATGTTAGTGC GAAAGGTTTC GAAAAACCTT 
CCTTATGTCC TCGATATTAT GTCTGTTTGC GTGCAAACCT GTATGACAAT TGAAGCGTCG 
TTTGCGTATT TAGCACAAGA GCTAAAAATC TTCGATAAAG ATTTATGTTA TCAAATCAAT 
AAAACATCAG AAGCCGGCAA AGTACATGGG ATAGAAAAAG CATTGCATGA TCTTTCCGTT 
CGCTTGCCTG CACCAGAAAT CAACAGCTTT GTCTTAACGA TTATTCAAAA CCTTCACTAT 
GGCGCATCCG TTGCGAATGT TTTAAGTGAT TTAGCCGAAG ATATGCGTCG GATTAAATTA 
CTCGAAATTG AAGAGAAAAT GGGTAAATTG TCAGCCAAAA TGAGTGTGCC TTTGATCTTG 
CTGATCATGT TTCCAATCGT CATTTTTATT CTTGCTCCTG GCTTTTTACA AATCGACTTT 
ACGAGCTTTA GAGGGGGTAA ATAA
 
Protein sequence
MALINKLLVS IIAVISIIIV PDLLLEMRKR MLVRKVSKNL PYVLDIMSVC VQTCMTIEAS 
FAYLAQELKI FDKDLCYQIN KTSEAGKVHG IEKALHDLSV RLPAPEINSF VLTIIQNLHY 
GASVANVLSD LAEDMRRIKL LEIEEKMGKL SAKMSVPLIL LIMFPIVIFI LAPGFLQIDF 
TSFRGGK