Gene VIBHAR_03342 details

Gene Information

• Locus tag: VIBHAR_03342
• ID: 5553100
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009783
• Strand: -
• Start bp: 3378375
• End bp: 3379067
• Gene Length: 693 bp
• Protein Length: 230 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 640908822
• Product: hypothetical protein
• Protein accession: YP_001446516
• Protein GI: 156975609
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGAGATA TGACCAAAAC AATGCTAATT ACAGGGATGC TGGTGGCCGG TTTCACGACC 
GTTAGTGCGA ATGCCAGTGA AGTCAGTTCA GAAGTGACCG AATACTGCGG GACGTCTTAT 
TATGAATACT CGCACTCCAT TCAGGTTGGC GAGGTGACGG GGGTGGCATC GCATCGTGAT 
GGCTATTTGC AAGTAACGGA TGTGAGTAAT GACCCCGCAC TGAAGTGGGC GCTGATGAAG 
AACTCATCAC TGCTCACCAA CCCGAATGAT TGCCTGACGT ATATCTCGAA TTTGGGTATC 
GCGCAATTCA GTGGTGAAGT CACGGATAAG GGTAAATTGA TTGCACGGGT TCACTTCGCG 
TTCGATCGTT TTAACCTCAC ACCGCTCGCG AGAGATGTCT TGAGCAGTGT TGCTCGTCAG 
CTTGCTCAAA CGGACTATCA AGTCACCGTG GAAGGGCATA CTGACTGGAT AGGCACCAAA 
GCCTATAACC AAACCTTGGG TCATAATCGA GCCAAAAGCA CTGCTCGTGA ACTGCACTAT 
TACGGGGTGA GCGAACAGAA AACCACGCTT AAATCCTTTG GTGAATCTGA ACCGATTGCC 
ACCAACAATA CTTCTTCGGG TCGTTCTAAA AATCGTAGAG CAGATGTTTA CATTCCAGCT 
GATGAACAGG AAAAACCACC AGCAACGGAA TAG 

 

Protein sequence

MRDMTKTMLI TGMLVAGFTT VSANASEVSS EVTEYCGTSY YEYSHSIQVG EVTGVASHRD 
GYLQVTDVSN DPALKWALMK NSSLLTNPND CLTYISNLGI AQFSGEVTDK GKLIARVHFA 
FDRFNLTPLA RDVLSSVARQ LAQTDYQVTV EGHTDWIGTK AYNQTLGHNR AKSTARELHY 
YGVSEQKTTL KSFGESEPIA TNNTSSGRSK NRRADVYIPA DEQEKPPATE