| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_03301 |
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| Symbol | |
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| ID | 5553020 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009783 |
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| Strand | - |
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| Start bp | 3324547 |
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| End bp | 3328185 |
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| Gene Length | 3639 bp |
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| Protein Length | 1212 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640908782 |
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| Product | ATP-dependent exoDNAse (exonuclease V) beta subunit |
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| Protein accession | YP_001446476 |
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| Protein GI | 156975569 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | [TIGR00609] exodeoxyribonuclease V, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCAAA TGTCAGTTCC AACTCCACTG CAAACCATGA TTTTTCCACT GCATGGTGCA
AGGTTAATTG AAGCATCGGC AGGTACAGGT AAAACCTTTA CGATCGCGGG TTTGTATCTG
CGACTTCTAC TAGGGCATGG CACTGCCAAT ACCAAACATC GCGTGCCGTT GACCGTGGAT
CAAATTCTGG TCGTGACCTT TACCGAAGCT GCAACGGCGG AGCTGCGTGA TCGTATTCGT
GCGCGTATTC ACGACGCGAG GATCGCATTC GCTCGCGGGA AAAGCTCAGA TCCTGTGATT
CAACCTTTGT TGGGAGAAAT CGAGGATCAT AAGCAAGCCG CTGAGATCCT CTTGCAAGCG
GAACGCCAAA TGGATGAAGC CGCGGTGTAC ACCATTCACG GTTTCTGCCA ACGCATGCTG
ACGCAAAACG CATTCGAATC CGGTAGTCGC TTCAACAATG AGTTTGTGAC AGACGAAAGC
CATCTCAAAG CGCAAGTGGT TGCCGATTAC TGGCGTCGTA ATTTCTATCC TCTGCCATTC
GCTTTGGCTG GAGAAGTGCG TCAACTATGG GGCTCGCCAT CGGATCTGTT GTATGACATC
AGCAACTACC TCACAGGCGC GCCGCTAAGT CTCTCTGTTC CAGCAATGCA AGGTAGCCTT
GCCGATTTGC ATGAGCAAAA CTTAAAGCAA ATTGATGCTT TGAAAGGCCA TTGGCGTGAT
AGCCAAGATG ATTTCCTCGC ACTGATTTCT GATTCCGACG TCAACAAGCG CAGCTACACC
AAAAAGTCTC TACCGACTTG GTTAGAAGCG GTCAACGTAT GGGCTTCGAC AGAAACCACG
GGCTATGACT ATCCAGATAA GCTGGAGAAG TTCGCCCAGA ATGTGTTACT TGAGAAAACC
CCGAAAGGCA CTGCACCACA ACACCCCGTG TTTGAGGCGA TAGAAGCCTT CATTGCCAAC
CCAATCAGCT TAAAAGCGCC ATTGTTAGCT CATGCGATTG AGCATTGTCG CGTGATGCTG
GCAAAAGCAA AAAATCAGAA ACAATGGTTG TCATTCGATG ACTTGCTGAC TCAGCTTTCT
GCCTCGATTG ATACCGATGA AACCGCACTA CTGACAGAGC GCATTCGCAC GCTTTATCCG
GTTGCGATGA TCGATGAATT CCAAGATACC GACCCACTGC AATACAGCAT TTTCAGTCGC
ATTTATTTGG ATAATCCTGA GTGCGGTTTG TTTATGATCG GTGACCCGAA ACAGGCGATT
TACGGTTTCC GTGGAGCGGA CATCTTCACT TACATCAAGG CTCGTAACCA AGTTAGTGCT
CACTACACGC TTGGCACCAA CTGGCGATCA AGTGCCGATA TGGTATTGGC AGTGAACCAG
ATTTTTGCTC TGCCAGATAG CCCGTTTATT TATGACTCCG ACATTCCATT CCATTCAGTG
GATTACAGCC CAAGTGCAGA CAAACGTGTT TGGACCATGG GTGGTCAAAA GCAGCCTGCA
CTGACTTATT GGCTGCAAGA AGCGGAAGAT AAACCTCTGC CAAAAGGTGA ATACCTGACC
GCTATGGCTG AGGCGACAGC AAGCCAAATT CAAACCATTT TGACCGCAGC GCAACAAGGT
CAAGCCTGTC TGGTTAATGG CGAAAAGCAG AAGCCAGTTA AAGCGGGCGA CATTGCAGTG
TTGGTGCGAA CGGGTAGCGA AGGTCGCATG GTCAAACAGG CGTTAGCCGA CCAAGGCATT
GCCAGCGTGT ACCTTTCTAA CCGCGATAGC GTGTTTACCA GTTCCGTTGC ACAAGATCTA
CAGCGTTTGC TGCAAGCGGT GTTAACGCCA GAAAACGACA GAGCATTACG CGCCAGTCTA
GCATCAGAAT TGTTCGCTCT TGATGCAGCC AGCTTAGACG CCCTCAACAA CGATGAAACC
GTGTGGGAAA ATGCGGTTAA CGAGTTCAAA GAATACCGTA AGCTTTGGGT GCAACGTGGT
GTGCTACCTA TGCTGCGTGC AGTGATCAGT AAGCGTCATA TTGCTGAGCG TCTACTAGAA
GAAGGGACGA GCTCACAAAG CGAAAACGGT GAGCGAGTGC TTACCGATCT GATGCACATT
GGTGAATTAT TGCAGCAAGC AAGTAACGAA TTAGACAGCG ACCACGGCTT GCTACGTTGG
TTAGCGCAAT CCATCAGCGA TGCAGAGCAC GGGTTGGGTG GCAGCGATGG CCAAATTCAG
CGTTTGGAAT CAGAGCGTAA CTTGGTGCAA ATCGTTACCA TTCACAAATC CAAAGGTCTG
GAATATGACT TGGTCTTCCT GCCATTTGTG TTTGGCTACC GAGAAGCGAG TGAGGCCAAA
TACTACGACG CTGAGAACGA TCGCACCGTA CTTGATATCA CGGGTAACGA TGCGTCGTTA
AAACAGGCAG ATAAAGAACG CCTTGCTGAA GACTTACGCC TTATCTATGT AGCGTTAACG
CGTGCCGTGT ATGCCTGCTT TATTGGTGCT TCACCGCTGC GCAATGGTCG CTCAACCAAA
GAGCCAACCG GCGTGCATCA CAGTGCGATT GGTTACTTGG TGCAAAATGG TCAAGAGGGT
GGCATCAACG ACCTGTTTGT TGGGTTGAAG AAGCAACAAG AGAGTTTCGA TAACGTGGTG
ATTTGTGATC CTCCAAAGCA ACACGACGAG ATGTATGTTG CGGAGCAAAC CGAGTTAGAA
GCGTTGACAG CTAAAGAGCT GAAAACCCCA ATTGATAGAA ACTGGCGAAT CACCAGTTAC
TCGGGCTTGG TTAAACAAGG TTCTCATCAT GCTGAGCATG ACGCGACGAT TGAAATTACC
GGCTTTGATA TCGATTCTTC AGAAGAGCAA GATGAGGCGG AATTGGTTGA GCCAGAACGC
TCTATCTTCA ACTTCCCGCG TGGCGCACGT CCGGGTACTT TTCTGCACAG CTTATTTGAG
GAAATTGAGT TTACTCAACC CGCGACAACG GAAGAGAACA CCCAAATCAT CCTCGGCTTG
ATGGAAAGTG AGCAGCTTGA TGAAGAGTGG CTACCAATCC TGCAACAGTT GATTGATAAC
GTGCTGGCAA CGCCTTTGGA TAGCAAAGCA CTGCTGCTCA ATCAAAAAGG CCCCGCACAA
CGTTTGGTTG AGATGGAATT CTTACTGCCG ATTGAAGTGC TATCTGCACC AGCATTGAAT
CGTGTGATTC AACGTCATGA TCCGCTGTCT GCTAAAGCTG GCGACCTGGG TTTCCAAACC
GTGCAAGGCA TGTTGAAAGG CTTTATTGAC TTGGTGTTTG AGCACCAAGG TAAATACTAC
GTCCTCGACT GGAAATCGAA CCACTTAGGC GATGATGTGT TCCATTATCA TGGCGATGCG
TTGAAGTCGG CGATGGCGGA TCATCGCTAC GATCTGCAAT ACCAAATCTA CGCCTTGGCG
CTGCATCGTT TCTTACGCAG CAGATTGCCA AATTATGATT ATGAACAGCA CTTTGGTGGT
GTTTATTACC TGTTCTTGCG TGGTATGGAT GGGCAGAGTG ATCACGGTAT TTTTTCTGCC
AAGCCAACTT TCGAATTTTT ACAAGAAATG GATCACTTGA TTGATGGTCA GGCACCTGAC
ACACGATCCA GTGCATCGGG TCAGATGGAG TTAATTTGA
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| Protein sequence | MAQMSVPTPL QTMIFPLHGA RLIEASAGTG KTFTIAGLYL RLLLGHGTAN TKHRVPLTVD
QILVVTFTEA ATAELRDRIR ARIHDARIAF ARGKSSDPVI QPLLGEIEDH KQAAEILLQA
ERQMDEAAVY TIHGFCQRML TQNAFESGSR FNNEFVTDES HLKAQVVADY WRRNFYPLPF
ALAGEVRQLW GSPSDLLYDI SNYLTGAPLS LSVPAMQGSL ADLHEQNLKQ IDALKGHWRD
SQDDFLALIS DSDVNKRSYT KKSLPTWLEA VNVWASTETT GYDYPDKLEK FAQNVLLEKT
PKGTAPQHPV FEAIEAFIAN PISLKAPLLA HAIEHCRVML AKAKNQKQWL SFDDLLTQLS
ASIDTDETAL LTERIRTLYP VAMIDEFQDT DPLQYSIFSR IYLDNPECGL FMIGDPKQAI
YGFRGADIFT YIKARNQVSA HYTLGTNWRS SADMVLAVNQ IFALPDSPFI YDSDIPFHSV
DYSPSADKRV WTMGGQKQPA LTYWLQEAED KPLPKGEYLT AMAEATASQI QTILTAAQQG
QACLVNGEKQ KPVKAGDIAV LVRTGSEGRM VKQALADQGI ASVYLSNRDS VFTSSVAQDL
QRLLQAVLTP ENDRALRASL ASELFALDAA SLDALNNDET VWENAVNEFK EYRKLWVQRG
VLPMLRAVIS KRHIAERLLE EGTSSQSENG ERVLTDLMHI GELLQQASNE LDSDHGLLRW
LAQSISDAEH GLGGSDGQIQ RLESERNLVQ IVTIHKSKGL EYDLVFLPFV FGYREASEAK
YYDAENDRTV LDITGNDASL KQADKERLAE DLRLIYVALT RAVYACFIGA SPLRNGRSTK
EPTGVHHSAI GYLVQNGQEG GINDLFVGLK KQQESFDNVV ICDPPKQHDE MYVAEQTELE
ALTAKELKTP IDRNWRITSY SGLVKQGSHH AEHDATIEIT GFDIDSSEEQ DEAELVEPER
SIFNFPRGAR PGTFLHSLFE EIEFTQPATT EENTQIILGL MESEQLDEEW LPILQQLIDN
VLATPLDSKA LLLNQKGPAQ RLVEMEFLLP IEVLSAPALN RVIQRHDPLS AKAGDLGFQT
VQGMLKGFID LVFEHQGKYY VLDWKSNHLG DDVFHYHGDA LKSAMADHRY DLQYQIYALA
LHRFLRSRLP NYDYEQHFGG VYYLFLRGMD GQSDHGIFSA KPTFEFLQEM DHLIDGQAPD
TRSSASGQME LI
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