| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_03162 |
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| Symbol | fliF |
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| ID | 5553566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009783 |
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| Strand | - |
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| Start bp | 3190667 |
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| End bp | 3192409 |
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| Gene Length | 1743 bp |
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| Protein Length | 580 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640908643 |
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| Product | flagellar MS-ring protein |
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| Protein accession | YP_001446338 |
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| Protein GI | 156975431 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCAGAAA AGTCTACAGA TTTAACCGTC ACTGATGGCG GCGCTGATGG TGCACTGATT
GCTGGCTCAG ATCTGGATGT GGAAAGCCAA AACCCAGATC TTGAAGAGCG CAGTACGTCA
AAATTCGATA TGGCAGTGGG CGACCTCGAT TTACTTCGTC AGGTCGTATT AGTGCTGTCT
ATCTCTATCT GTGTTGCGTT GATCGTGATG CTGTTCTTCT GGGTGAAAGA GCCGGAAATG
CGTCCACTCG GTGCATACGA AACGGAAGAA CTGATCCCAG TGCTGGATTA TCTCGACCAG
CAAAAAATCA ATTACAAGCT AGATGGCAAT ACCATTTCGG TTGAATCGAG CGATTACAAC
TCGATTAAGC TAGGCATGGT GCGTGCAGGT GTCAACCAAG CAACAGCGGC GGGCGATGAC
ATTCTGCTGC AAGACATGGG CTTTGGTGTA TCACAGCGCT TGGAACAAGA GCGTTTGAAG
CTCAGCCGTG AGCGCCAACT TGCGCAAGCC ATCGAAGAGA TGAAGCAGGT GCGTAAAGCG
CGTGTTCTTC TCGCTCTACC AAAACACAGC GTGTTTGTTC GTCACAACCA AGAAGCGTCT
GCTTCGGTAT TTTTGACGCT CTCTACAGGC GCAAACCTGA AACAACAAGA AGTGGATTCC
ATCGTTGATA TGGTGGCGAG TGCTGTTCCG GGAATGAAGA CTTCTCGTAT TACGGTAACC
GATCAACACG GTCGTCTACT GAGCTCAGGT TCCCAAGACC CAGCATCTGC TGCACGTCGT
AAAGAGCAAG AGCTAGAACG CAGCCAAGAG CAAGCGCTGC GCGAAAAGAT TGATTCAGTA
CTTCTGCCTA TTCTAGGTTT TGGTAACTAC ACCGCTCAGG TAGATATCCA GATGGATTTC
AGCACCGTCG AGCAAACTCG TAAAAACTTC GATCCGAATA CGCCGTCTAC GCGCAGTGAA
TATGCGCTGG AAGATTACAA CAACGGCAAC ATGGTTGCGG GCATTCCAGG TGCATTGAGT
AACCAACCGC CAGCGGATGC GTCTATTCCG CAGGACGTGG CGCAGATGAA AGACGGCACA
TTGACTGGTC AAGGCTCAGT ACGTAAAGAA TCGACGCGTA ACTTCGAGCT TGATACCACC
ATCAGTCATG AACGCAAGCA AACCGGCACG TTGGCTCGTC AGACCGTTTC GGTTGCAATC
AAAGACCGTC GCACCGTGAA CCCAGATACG GGTGAGGTGA CTTACACGCC GCTGTCAGAA
TCTGAAATCA ACGCGATTCG CCAAGTGCTG ATCGGTACCG TTGGCTTTGA TGAGAACCGC
GGTGACTTGC TCAATGTACT GAGTGTGAAG TTTGCTGAGC CAGAGCTTGA GCAAATGGTT
GATCCACCTA TTTGGGAACA TCCAAACTTC AACGATTGGG TTCGTTGGTT TGCAAGTGCG
CTAGTGATCA TCGTGGTTAT CTTGGTTCTG GTTCGCCCTG CAATGAAGAA ACTTCTCAAT
CCAGCAAGTG GTGACGAAGA CGAAATGTAC GGACCAGATG GCTTGCCAAT TGGTGCGGAT
GGCGAAACCA GCCTGATTGG TAGCGACATC GAAAGCGGTG AACTGTTTGA ATTTGGTTCA
AGCATTGATC TGCCTAACCT TCATAAAGAT GAAGATGTAC TCAAAGCAGT ACGTGCTCTG
GTGGCAAACG AGCCAGAGCT TGCTGCTCAA GTTGTGAAAA ACTGGATGGA CGAAAATGGC
TAA
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| Protein sequence | MAEKSTDLTV TDGGADGALI AGSDLDVESQ NPDLEERSTS KFDMAVGDLD LLRQVVLVLS
ISICVALIVM LFFWVKEPEM RPLGAYETEE LIPVLDYLDQ QKINYKLDGN TISVESSDYN
SIKLGMVRAG VNQATAAGDD ILLQDMGFGV SQRLEQERLK LSRERQLAQA IEEMKQVRKA
RVLLALPKHS VFVRHNQEAS ASVFLTLSTG ANLKQQEVDS IVDMVASAVP GMKTSRITVT
DQHGRLLSSG SQDPASAARR KEQELERSQE QALREKIDSV LLPILGFGNY TAQVDIQMDF
STVEQTRKNF DPNTPSTRSE YALEDYNNGN MVAGIPGALS NQPPADASIP QDVAQMKDGT
LTGQGSVRKE STRNFELDTT ISHERKQTGT LARQTVSVAI KDRRTVNPDT GEVTYTPLSE
SEINAIRQVL IGTVGFDENR GDLLNVLSVK FAEPELEQMV DPPIWEHPNF NDWVRWFASA
LVIIVVILVL VRPAMKKLLN PASGDEDEMY GPDGLPIGAD GETSLIGSDI ESGELFEFGS
SIDLPNLHKD EDVLKAVRAL VANEPELAAQ VVKNWMDENG
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